C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: basonuclin 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000617779 BNC2-015 ENSG00000173068 9606 - 9:16583060-16867692 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainLungENST00000617779
Transcript ID Brain Lung
ENST00000617779 0.180±0.00 4.651±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007PP CIL_0007PP_0001 UCNEbase 9:15728012-17487698
CIL_000148 CIL_000148_0001 CGP 9:16409503-17503923

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000176346 Bnc2-015 nonsense_mediated_decay Mus_musculus 0 518
ENSMUST00000123276 Bnc2-003 retained_intron Mus_musculus 0 518
ENSMUST00000107198 Bnc2-007 protein_coding Mus_musculus 0 518
ENSMUST00000176418 Bnc2-006 protein_coding Mus_musculus 0 484
ENSMUST00000102820 Bnc2-002 protein_coding Mus_musculus 0 483
ENSMUST00000176370 Bnc2-014 protein_coding Mus_musculus 0 470
ENSMUST00000177256 Bnc2-018 processed_transcript Mus_musculus 0 390
ENSMUST00000175800 Bnc2-005 protein_coding Mus_musculus 0 390
ENSMUST00000176612 Bnc2-004 protein_coding Mus_musculus 0 388
ENSMUST00000176947 Bnc2-016 protein_coding Mus_musculus 0 353
ENSMUST00000177040 Bnc2-020 protein_coding Mus_musculus 2.00386e-43 180

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