C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000618718 CITED2-203 ENSG00000164442 9606 - 6:139373074-139374605 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLungOvaryPlacentaTestisENST00000618718
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Lung Ovary Placenta Testis
ENST00000618718 67.769±0.00 16.405±0.00 2.979±0.00 5.072±1.26 53.924±0.00 47.840±0.00 13.437±9.20 12.303±4.65 41.190±0.00 43.068±20.33 104.555±45.21 11.702±2.21

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00030P CIL_00030P_0002 CGP 6:139240061-139374620
CIL_00030Q CIL_00030Q_0002 CGP 6:139371807-142088799

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000122 IMP negative regulation of transcription from RNA polymerase II promoter
GO:0000790 ISS nuclear chromatin
GO:0001106 IDA RNA polymerase II transcription corepressor activity
GO:0001666 IMP response to hypoxia
GO:0001889 ISS liver development
GO:0003151 ISS outflow tract morphogenesis
GO:0003156 ISS regulation of organ formation
GO:0003682 ISS chromatin binding
GO:0003700 ISS sequence-specific DNA binding transcription factor activity
GO:0003713 IDA transcription coactivator activity
GO:0003714 IMP transcription corepressor activity
GO:0005515 IPI protein binding
GO:0005634 IMP:IEA nucleus
GO:0005737 IMP cytoplasm
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0007368 ISS determination of left/right symmetry
GO:0007507 ISS heart development
GO:0007530 ISS sex determination
GO:0008283 IDA cell proliferation
GO:0010628 IDA positive regulation of gene expression
GO:0010629 IDA negative regulation of gene expression
GO:0022409 ISS positive regulation of cell-cell adhesion
GO:0030336 IMP negative regulation of cell migration
GO:0030511 ISS positive regulation of transforming growth factor beta receptor signaling pathway
GO:0034405 IMP response to fluid shear stress
GO:0035035 IDA histone acetyltransferase binding
GO:0035360 IDA positive regulation of peroxisome proliferator activated receptor signaling pathway
GO:0035802 ISS adrenal cortex formation
GO:0043066 ISS negative regulation of apoptotic process
GO:0043627 IDA response to estrogen
GO:0045787 ISS positive regulation of cell cycle
GO:0045892 IDA negative regulation of transcription, DNA-templated
GO:0045893 ISS positive regulation of transcription, DNA-templated
GO:0045944 ISS positive regulation of transcription from RNA polymerase II promoter
GO:0048536 ISS spleen development
GO:0050693 IPI LBD domain binding
GO:0060412 ISS ventricular septum morphogenesis
GO:0060971 ISS embryonic heart tube left/right pattern formation
GO:0061428 IDA negative regulation of transcription from RNA polymerase II promoter in response to hypoxia
GO:0070986 ISS left/right axis specification
GO:1900164 ISS nodal signaling pathway involved in determination of lateral mesoderm left/right asymmetry
GO:2000020 ISS positive regulation of male gonad development
GO:2001141 IDA regulation of RNA biosynthetic process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000038107 Cited2-201 protein_coding Mus_musculus 0 1003

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