C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_00030Q_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000030905-ENSDARG00000054152 CGP 7955 20:36939751-37311715
GeneTranscriptPositionBiotype
ENSDARG00000030905 (cited2)
Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 2 		ENSDART00000046716 (cited2-001) 36939751-36942278 protein_coding
ENSDARG00000054152 (nmbr)
neuromedin B receptor 		ENSDART00000076309 (nmbr-001) 37289964-37311715 protein_coding
ENSDARG00000096706 (si:ch211-270h14.1)
si:ch211-270h14.1 		ENSDART00000153356 (si:ch211-270h14.1-004) 36950576-37231981 lincRNA
ENSDART00000155058 (si:ch211-270h14.1-002) 36950562-37094418 lincRNA
ENSDART00000155453 (si:ch211-270h14.1-001) 36950565-36973018 lincRNA
ENSDART00000156004 (si:ch211-270h14.1-003) 36950567-37231926 lincRNA

Danio rerio Ensembl (Zv9)

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CIL_00030Q_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000164442-ENSG00000135577 CGP 9606 6:139371807-142088799
GeneTranscriptPositionBiotype
ENSG00000135577 (NMBR)
neuromedin B receptor 		ENST00000258042 (NMBR-001) 142075608-142088799 protein_coding
ENST00000480652 (NMBR-002) 142058330-142075922 processed_transcript
ENSG00000164442 (CITED2)
Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 2 		ENST00000367651 (CITED2-001) 139371807-139374620 protein_coding
ENST00000536159 (CITED2-201) 139372255-139374362 protein_coding
ENST00000537332 (CITED2-202) 139372255-139374213 protein_coding
ENST00000618718 (CITED2-203) 139373074-139374605 protein_coding
ENSG00000205695 (RP11-15H7.2)
 ENST00000381279 (RP11-15H7.2-001) 139659928-139661513 processed_pseudogene
ENSG00000216548 (RP11-471B18.1)
 ENST00000407538 (RP11-471B18.1-001) 140922457-140922910 processed_pseudogene
ENSG00000217684 (RPS3AP24)
ribosomal protein S3a pseudogene 24 		ENST00000407896 (RPS3AP24-001) 140761529-140762262 processed_pseudogene
ENSG00000219806 (ATP5F1P6)
ATP synthase, H+ transporting, mitochondrial Fo complex, subunit B1 pseudogene 6 		ENST00000402768 (ATP5F1P6-001) 139614438-139615204 processed_pseudogene
ENSG00000225148 (RP5-899B16.2)
 ENST00000445585 (RP5-899B16.2-001) 139856104-139877391 lincRNA
ENSG00000231426 (RP5-899B16.1)
 ENST00000414038 (RP5-899B16.1-002) 139854850-139859808 lincRNA
ENST00000431609 (RP5-899B16.1-001) 139854919-139860151 lincRNA
ENSG00000234147 (RP3-460G2.2)
 ENST00000455011 (RP3-460G2.2-001) 140845958-140852924 lincRNA
ENSG00000236013 (RP3-332B22.1)
 ENST00000418834 (RP3-332B22.1-002) 140083095-140088430 lincRNA
ENST00000446458 (RP3-332B22.1-003) 140086682-140093665 lincRNA
ENST00000456896 (RP3-332B22.1-001) 140067435-140093721 lincRNA
ENSG00000238099 (RP11-12A2.3)
 ENST00000454788 (RP11-12A2.3-001) 139468995-139474596 lincRNA
ENSG00000259828 (RP11-63E9.1)
 ENST00000565399 (RP11-63E9.1-001) 141447011-141451006 lincRNA
ENSG00000263514 (MIR3668)
microRNA 3668 		ENST00000582138 (MIR3668-201) 140205252-140205326 miRNA
ENSG00000270983 (RP11-137J7.3)
 ENST00000604304 (RP11-137J7.3-001) 142062717-142063053 processed_pseudogene

Homo sapiens Ensembl (GRCh38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00030Q_0001ENSDARG00000030905ENSDART00000046716ENSDARG00000054152ENSDART00000076309ENSDARG00000096706ENSDART00000153356ENSDART00000155058ENSDART00000155453ENSDART00000156004CIL_00030Q_0002ENSG00000135577ENST00000258042ENST00000480652ENSG00000164442ENST00000367651ENST00000536159ENST00000537332ENST00000618718ENSG00000205695ENST00000381279ENSG00000216548ENST00000407538ENSG00000217684ENST00000407896ENSG00000219806ENST00000402768ENSG00000225148ENST00000445585ENSG00000231426ENST00000414038ENST00000431609ENSG00000234147ENST00000455011ENSG00000236013ENST00000418834ENST00000446458ENST00000456896ENSG00000238099ENST00000454788ENSG00000259828ENST00000565399ENSG00000263514ENST00000582138ENSG00000270983ENST00000604304
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00030Q_0001ENSDARG00000030905ENSDART00000046716ENSDARG00000054152ENSDART00000076309ENSDARG00000096706ENSDART00000153356ENSDART00000155058CIL_00030Q_0002ENSG00000135577ENST00000258042ENST00000480652ENSG00000164442ENST00000367651ENST00000537332ENST00000618718ENSG00000205695ENST00000381279ENSG00000216548ENST00000407538ENSG00000217684ENST00000407896ENSG00000219806ENST00000402768ENSG00000225148ENST00000445585ENSG00000231426ENST00000414038ENST00000431609ENSG00000234147ENST00000455011ENSG00000236013ENST00000418834ENST00000446458ENST00000456896ENSG00000238099ENST00000454788ENSG00000259828ENST00000565399ENSG00000263514ENST00000582138ENSG00000270983ENST00000604304
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000030905 ENSDART00000046716 N/A N/A N/A 18.261±7.09 N/A N/A 5.548±0.59 3.336±0.50 0.144±0.00 N/A 3.395±0.00 N/A N/A N/A
ENSDARG00000054152 ENSDART00000076309 N/A N/A N/A 0.943±0.33 N/A N/A 0.036±0.00 0.036±0.00 N/A N/A 0.039±0.00 N/A N/A N/A
ENSDARG00000096706 ENSDART00000153356 N/A N/A N/A N/A N/A N/A 0.113±0.00 0.509±0.00 N/A N/A N/A N/A N/A N/A
ENSDART00000155058 N/A N/A N/A 0.271±0.00 N/A N/A 0.478±0.35 1.385±0.00 0.073±0.00 N/A N/A N/A N/A N/A
ENSDART00000155453 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDART00000156004 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000135577 ENST00000258042 N/A N/A N/A 0.259±0.09 N/A N/A 0.018±0.01 0.065±0.00 N/A N/A N/A 0.102±0.02 N/A 0.352±0.07
ENST00000480652 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.550±0.31
ENSG00000164442 ENST00000367651 N/A 1.550±0.00 5.869±0.00 1.194±0.65 5.016±1.28 4.683±0.00 1.021±0.00 4.984±0.00 2.892±0.00 17.684±0.00 N/A 6.104±3.72 N/A N/A
ENST00000536159 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000537332 N/A N/A N/A 3.530±0.00 3.520±0.00 5.006±0.00 7.323±4.31 5.174±0.00 1.773±0.00 15.516±0.00 20.593±16.87 24.902±20.68 94.380±48.11 9.161±5.42
ENST00000618718 67.769±0.00 16.405±0.00 2.979±0.00 5.072±1.26 53.924±0.00 47.840±0.00 13.437±9.20 12.303±4.65 N/A 41.190±0.00 N/A 43.068±20.33 104.555±45.21 11.702±2.21
ENSG00000205695 ENST00000381279 N/A N/A 0.234±0.00 N/A N/A N/A N/A N/A N/A 0.061±0.00 N/A 0.021±0.00 N/A 0.007±0.00
ENSG00000216548 ENST00000407538 0.122±0.00 0.033±0.00 N/A N/A N/A N/A 0.030±0.00 N/A N/A N/A 0.028±0.00 0.217±0.00 N/A 0.029±0.00
ENSG00000217684 ENST00000407896 N/A N/A N/A 0.014±0.00 N/A 0.097±0.00 0.054±0.00 0.014±0.00 N/A N/A N/A N/A 0.103±0.04 N/A
ENSG00000219806 ENST00000402768 N/A N/A 0.079±0.00 N/A N/A 0.015±0.00 0.046±0.00 N/A 0.015±0.00 N/A 0.015±0.00 N/A N/A 0.015±0.00
ENSG00000225148 ENST00000445585 N/A N/A N/A N/A 0.036±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 0.041±0.00
ENSG00000231426 ENST00000414038 N/A N/A N/A N/A N/A N/A N/A 0.460±0.00 0.233±0.00 N/A N/A 0.162±0.00 0.478±0.00 N/A
ENST00000431609 N/A N/A N/A N/A 0.171±0.00 N/A N/A 0.241±0.00 N/A N/A N/A 0.018±0.00 0.203±0.00 0.136±0.00
ENSG00000234147 ENST00000455011 0.315±0.00 0.608±0.00 N/A 0.077±0.00 0.323±0.00 0.263±0.00 0.731±0.00 0.394±0.00 0.758±0.00 1.282±0.38 N/A 0.091±0.03 0.300±0.13 0.414±0.31
ENSG00000236013 ENST00000418834 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.059±0.01 0.087±0.00
ENST00000446458 0.116±0.00 0.030±0.00 N/A 0.170±0.00 0.059±0.00 N/A 4.668±0.00 N/A N/A 0.543±0.00 N/A N/A 0.188±0.11 0.427±0.00
ENST00000456896 0.021±0.00 N/A N/A N/A N/A 0.016±0.00 N/A N/A N/A 0.045±0.00 N/A N/A 0.089±0.00 N/A
ENSG00000238099 ENST00000454788 0.049±0.00 0.054±0.00 0.183±0.00 0.124±0.02 0.213±0.09 0.011±0.00 N/A 0.135±0.11 0.015±0.00 N/A N/A 0.079±0.09 0.016±0.00 0.147±0.07
ENSG00000259828 ENST00000565399 0.018±0.00 0.007±0.00 N/A 0.029±0.02 0.029±0.00 0.019±0.01 0.314±0.06 0.017±0.00 N/A N/A N/A 0.005±0.00 0.006±0.00 0.013±0.00
ENSG00000263514 ENST00000582138 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.000±0.00
ENSG00000270983 ENST00000604304 0.083±0.00 0.045±0.00 N/A 0.089±0.00 0.258±0.17 N/A 0.040±0.00 0.045±0.00 0.122±0.00 0.135±0.00 0.040±0.00 N/A N/A 0.139±0.02

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