| Transcript ID | Colon |
|---|---|
| ENST00000619707 | 1.083±0.00 |
C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
||||||
| Description: | chromosome 9 open reading frame 72 | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENST00000619707  |
C9orf72-201 |
ENSG00000147894 |
9606 | - |
9:27546545-27573866  |
protein_coding |
Expression Patterns
|
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_00061J | CIL_00061J_0001 | CGP | 9:27524314-27573866 |
| CIL_00061K | CIL_00061K_0001 | CGP | 9:27546545-28670286 |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| GO:0005515 | IPI | protein binding |
| GO:0005615 | IDA | extracellular space |
| GO:0005634 | IDA | nucleus |
| GO:0005737 | IEA | cytoplasm |
| GO:0005764 | IDA | lysosome |
| GO:0005768 | IDA | endosome |
| GO:0005776 | IDA | autophagic vacuole |
| GO:0006897 | IMP | endocytosis |
| GO:0006914 | IMP | autophagy |
| GO:0008219 | IEA | cell death |
| GO:0017137 | IDA | Rab GTPase binding |
| GO:0031410 | IEA | cytoplasmic vesicle |
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENSMUST00000108127
|
3110043O21Rik-001 | protein_coding | Mus_musculus | 0 | 1914 |
|
ENSMUST00000084724
|
3110043O21Rik-007 | protein_coding | Mus_musculus | 0 | 1629 |
|
ENSMUST00000108126
|
3110043O21Rik-002 | protein_coding | Mus_musculus | 0 | 1317 |
|
ENSMUST00000156472
|
3110043O21Rik-003 | retained_intron | Mus_musculus | 0 | 918 |
|
ENSMUST00000130538
|
3110043O21Rik-004 | processed_transcript | Mus_musculus | 0 | 603 |
|
ENSMUST00000149138
|
3110043O21Rik-005 | processed_transcript | Mus_musculus | 0 | 385 |
