C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: transcriptional adaptor 2A
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000620628 TADA2A-004 ENSG00000276234 9606 + 17:37406890-37478267 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000620628
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000620628 1.618±0.00 4.140±0.00 1.198±0.00 4.034±0.00 2.271±0.59 1.860±0.48 0.802±0.10 1.813±0.00 1.136±0.22 0.945±0.51 2.068±0.00 3.227±1.08 2.749±0.57 4.906±0.92

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008GS CIL_0008GS_0001 VISTA 17:36817120-37418221
CIL_0005HU CIL_0005HU_0002 CGP 17:37406874-37513501

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003677 IEA DNA binding
GO:0003682 IEA chromatin binding
GO:0005515 IEA protein binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000018795 Tada2a-001 protein_coding Mus_musculus 0 1777
ENSMUST00000141852 Tada2a-005 protein_coding Mus_musculus 0 917
ENSMUST00000134994 Tada2a-004 processed_transcript Mus_musculus 0 313
ENSMUST00000125566 Tada2a-003 processed_transcript Mus_musculus 0 257

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