C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: receptor-like tyrosine kinase
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000620660 RYK-201 ENSG00000163785 9606 - 3:134157134-134250744 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000620660
Transcript ID Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000620660 1.435±0.34 2.785±0.00 5.640±0.00 3.989±0.00 5.603±3.19 6.061±0.00 1.942±0.00 4.486±3.15 5.041±1.61 6.870±0.00 10.531±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004672 IEA protein kinase activity
GO:0004713 IEA protein tyrosine kinase activity
GO:0005109 IEA frizzled binding
GO:0005515 IEA protein binding
GO:0005524 IEA ATP binding
GO:0005634 IEA nucleus
GO:0005737 IEA cytoplasm
GO:0005886 IEA plasma membrane
GO:0006468 IEA protein phosphorylation
GO:0007409 IEA axonogenesis
GO:0007411 IEA axon guidance
GO:0016020 IEA membrane
GO:0016055 IEA Wnt signaling pathway
GO:0016772 IEA transferase activity, transferring phosphorus-containing groups
GO:0017147 IEA Wnt-protein binding
GO:0022038 IEA corpus callosum development
GO:0030182 IEA neuron differentiation
GO:0031175 IEA neuron projection development
GO:0042813 IEA Wnt-activated receptor activity
GO:0048705 IEA skeletal system morphogenesis
GO:0048843 IEA negative regulation of axon extension involved in axon guidance
GO:0050919 IEA negative chemotaxis
GO:0071679 IEA commissural neuron axon guidance

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000175883 Ryk-003 protein_coding Mus_musculus 0 2503
ENSMUST00000035142 Ryk-001 protein_coding Mus_musculus 0 2449
ENSMUST00000176198 Ryk-002 nonsense_mediated_decay Mus_musculus 0 2182
ENSMUST00000175788 Ryk-004 retained_intron Mus_musculus 0 494

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