C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: MDM4, p53 regulator
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000621032 MDM4-208 ENSG00000198625 9606 + 1:204516406-204554200 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; HeartLiverLungOvaryPlacentaTestisENST00000621032
Transcript ID Heart Liver Lung Ovary Placenta Testis
ENST00000621032 0.654±0.00 2.788±0.00 3.771±0.00 1.340±0.00 0.946±0.00 2.200±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00084Z CIL_00084Z_0001 VISTA 1:204154830-204755807

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding
GO:0005634 IEA nucleus
GO:0043066 IEA negative regulation of apoptotic process
GO:0071157 IEA negative regulation of cell cycle arrest

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000185398 Mdm4-004 nonsense_mediated_decay Mus_musculus 0 1507
ENSMUST00000121299 Mdm4-ps-001 processed_pseudogene Mus_musculus 0 1090
ENSMUST00000067398 Mdm4-003 protein_coding Mus_musculus 0 1083
ENSMUST00000067429 Mdm4-005 protein_coding Mus_musculus 0 1083
ENSMUST00000188090 Mdm4-001 protein_coding Mus_musculus 0 1083
ENSMUST00000191212 Mdm4-002 nonsense_mediated_decay Mus_musculus 0 1031
ENSMUST00000186617 Mdm4-006 protein_coding Mus_musculus 0 527
ENSMUST00000185418 Mdm4-010 retained_intron Mus_musculus 0 444
ENSMUST00000190807 Mdm4-009 protein_coding Mus_musculus 0 387
ENSMUST00000190312 Mdm4-011 processed_transcript Mus_musculus 0 374
ENSMUST00000189596 Mdm4-012 retained_intron Mus_musculus 0 333
ENSMUST00000187529 Mdm4-013 retained_intron Mus_musculus 0 263
ENSMUST00000186513 Mdm4-008 retained_intron Mus_musculus 7.00005e-41 174

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