C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: DEAH (Asp-Glu-Ala-His) box polypeptide 29
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000621106 DHX29-201 ENSG00000067248 9606 - 5:55256246-55307674 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBrainColonLiverMuscleOvaryPlacentaTestisENST00000621106
Transcript ID Adrenal Brain Colon Liver Muscle Ovary Placenta Testis
ENST00000621106 2.529±0.00 1.828±0.00 1.514±0.00 2.192±0.00 1.919±0.51 0.535±0.00 1.152±0.00 1.418±0.15

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007G0 CIL_0007G0_0002 CGP 5:55256245-55425581

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003676 IEA nucleic acid binding
GO:0004386 IEA helicase activity
GO:0005524 IEA ATP binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000038574 Dhx29-201 protein_coding Mus_musculus 0 4283
ENSMUST00000112600 Phc1-203 protein_coding Mus_musculus 0.0003 53
ENSMUST00000079560 Phc1-201 protein_coding Mus_musculus 0.0003 53
ENSMUST00000081849 Phc1-202 protein_coding Mus_musculus 0.0003 53
ENSMUST00000161877 Phc1-003 nonsense_mediated_decay Mus_musculus 0.0003 53
ENSMUST00000160163 Phc1-002 nonsense_mediated_decay Mus_musculus 0.0003 53
ENSMUST00000161054 Phc1-001 protein_coding Mus_musculus 0.0003 53
ENSMUST00000159252 Phc1-006 protein_coding Mus_musculus 0.0003 53
ENSMUST00000160696 Phc1-005 protein_coding Mus_musculus 0.0003 53
ENSMUST00000161739 Phc1-004 protein_coding Mus_musculus 0.0003 53

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