C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
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| Description: | NOP16 nucleolar protein | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENST00000621444  |
NOP16-002 |
ENSG00000048162 |
9606 | - |
5:176383946-176388762  |
protein_coding |
Expression PatternsNo expression data. |
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_0002DL | CIL_0002DL_0001 | CGP | 5:176346061-176401865 |
| CIL_00098R | CIL_00098R_0001 | VISTA | 5:176349731-176951529 |
| CIL_0000P0 | CIL_0000P0_0002 | CGP | 5:176365468-176401865 |
| CIL_0002N9 | CIL_0002N9_0001 | CGP | 5:176383938-176389771 |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| GO:0005634 | IDA | nucleus |
| GO:0005730 | IDA | nucleolus |
| GO:0043231 | IDA | intracellular membrane-bounded organelle |
| GO:0044822 | IDA | poly(A) RNA binding |
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENSMUST00000148222
|
Nop16-003 | protein_coding | Mus_musculus | 0 | 494 |
|
ENSMUST00000026987
|
Nop16-001 | protein_coding | Mus_musculus | 0 | 494 |
|
ENSMUST00000149462
|
Nop16-002 | nonsense_mediated_decay | Mus_musculus | 4e-32 | 143 |
