C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: SYNJ2BP-COX16 readthrough
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000621525 SYNJ2BP-COX16-002 ENSG00000258644 9606 - 14:70326064-70417074 protein_coding

Expression Patterns

No expression data.

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006J1 CIL_0006J1_0002 CGP 14:70044217-70359731

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000166664 Gm20498-002 protein_coding Mus_musculus 0 725
ENSMUST00000164386 Gm20498-001 protein_coding Mus_musculus 0 582
ENSMUST00000170958 Gm20498-005 processed_transcript Mus_musculus 0 497
ENSMUST00000163402 Synj2bp-001 protein_coding Mus_musculus 0 440
ENSMUST00000110339 Gm20498-003 processed_transcript Mus_musculus 0 436
ENSMUST00000169158 Synj2bp-003 protein_coding Mus_musculus 0 436
ENSMUST00000114201 Synj2bp-002 protein_coding Mus_musculus 0 357
ENSMUST00000171237 Cox16-007 processed_transcript Mus_musculus 0 291
ENSMUST00000002757 Cox16-001 protein_coding Mus_musculus 0 291
ENSMUST00000171459 Gm20498-004 nonsense_mediated_decay Mus_musculus 0 274
ENSMUST00000168961 Gm20498-006 processed_transcript Mus_musculus 0 237
ENSMUST00000110340 Cox16-003 protein_coding Mus_musculus 7e-34 148
ENSMUST00000169124 Cox16-005 protein_coding Mus_musculus 3e-33 147
ENSMUST00000163282 Cox16-004 processed_transcript Mus_musculus 3e-33 147
ENSMUST00000168463 Cox16-009 protein_coding Mus_musculus 3e-33 147
ENSMUST00000166723 Cox16-008 protein_coding Mus_musculus 3e-33 147
ENSMUST00000167819 Cox16-006 processed_transcript Mus_musculus 1e-32 145
ENSMUST00000169912 Cox16-002 retained_intron Mus_musculus 4e-17 94

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