C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: L antigen family, member 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000621786 LAGE3-201 ENSG00000196976 9606 - X:154477773-154478912 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000621786
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000621786 7.667±0.00 10.593±0.00 11.960±10.23 11.480±0.00 10.001±0.00 6.459±6.29 11.390±0.00 13.332±0.00 5.722±4.91 11.734±0.00 21.943±19.64 14.238±6.70 13.259±6.39

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003LD CIL_0003LD_0001 CGP X:154458281-154479257
CIL_0006KI CIL_0006KI_0001 CGP X:154477769-154486670

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000015433 Lage3-001 protein_coding Mus_musculus 0 215
ENSMUST00000180449 Gm6723-001 processed_pseudogene Mus_musculus 5.04467e-44 182
ENSMUST00000086601 Gm16391-001 processed_pseudogene Mus_musculus 6e-38 161
ENSMUST00000114152 Lage3-003 protein_coding Mus_musculus 5e-29 132
ENSMUST00000114153 Lage3-002 protein_coding Mus_musculus 5e-29 132

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