C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
||||||
| Description: | ||||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENST00000622355  |
RP5-864K19.7-001 |
ENSG00000273637 |
9606 | - |
1:38839333-38874494  |
protein_coding |
Expression PatternsNo expression data. |
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_0008PZ | CIL_0008PZ_0001 | VISTA | 1:38426937-39028462 |
| CIL_0008G7 | CIL_0008G7_0001 | VISTA | 1:38483085-39084457 |
| CIL_0007Q3 | CIL_0007Q3_0001 | VISTA | 1:38525828-39126769 |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| GO:0005525 | IEA | GTP binding |
| GO:0005634 | IEA | nucleus |
| GO:0005737 | IEA | cytoplasm |
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENSMUST00000030399
|
Rragc-001 | protein_coding | Mus_musculus | 0 | 1524 |
|
ENSMUST00000155757
|
Rragc-002 | nonsense_mediated_decay | Mus_musculus | 0 | 1225 |
|
ENSMUST00000133445
|
Rragc-005 | retained_intron | Mus_musculus | 0 | 977 |
|
ENSMUST00000155454
|
Rragc-004 | processed_transcript | Mus_musculus | 0 | 658 |
|
ENSMUST00000137685
|
Mycbp-004 | processed_transcript | Mus_musculus | 0 | 512 |
|
ENSMUST00000030400
|
Mycbp-001 | protein_coding | Mus_musculus | 0 | 508 |
|
ENSMUST00000106202
|
Mycbp-002 | protein_coding | Mus_musculus | 0 | 388 |
|
ENSMUST00000143635
|
Rragc-003 | processed_transcript | Mus_musculus | 0 | 355 |
|
ENSMUST00000147340
|
Mycbp-003 | processed_transcript | Mus_musculus | 4.2039e-45 | 187 |
