C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: SREK1-interacting protein 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000622404 SREK1IP1-201 ENSG00000153006 9606 - 5:64723312-64768599 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonKidneyLiverLungOvaryPlacentaTestisENST00000622404
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Kidney Liver Lung Ovary Placenta Testis
ENST00000622404 2.803±0.00 5.028±0.00 0.283±0.00 1.668±0.00 3.257±0.00 4.991±0.00 1.828±0.00 1.036±0.00 3.059±0.00 2.443±0.00 1.989±0.00 7.124±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007FV CIL_0007FV_0002 CGP 5:64718144-65018763

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003676 IEA nucleic acid binding
GO:0008270 IEA zinc ion binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000022230 Srek1ip1-001 protein_coding Mus_musculus 0 529
ENSMUST00000156105 Srek1ip1-002 nonsense_mediated_decay Mus_musculus 0 235
ENSMUST00000147061 Srek1ip1-005 retained_intron Mus_musculus 4.06377e-44 183
ENSMUST00000145661 Srek1ip1-003 processed_transcript Mus_musculus 4e-39 167

Loading