C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: mutS homolog 6
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000622629 MSH6-205 ENSG00000116062 9606 + 2:47783082-47806952 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderHeartLungOvaryPlacentaTestisENST00000622629
Transcript ID Bladder Heart Lung Ovary Placenta Testis
ENST00000622629 1.687±0.00 2.308±1.34 3.944±0.17 12.672±0.00 7.207±4.84 22.320±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00066I CIL_00066I_0001 CGP 2:47695530-47905793

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005524 IEA ATP binding
GO:0006298 IEA mismatch repair
GO:0030983 IEA mismatched DNA binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000005503 Msh6-201 protein_coding Mus_musculus 0 4132
ENSMUST00000121562 Gm11855-001 processed_pseudogene Mus_musculus 0 1515

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