C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: excision repair cross-complementation group 6
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000623115 ERCC6-006 ENSG00000225830 9606 - 10:49458788-49502122 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBrainBreastColonLungOvaryPlacentaTestisENST00000623115
Transcript ID Adipose Brain Breast Colon Lung Ovary Placenta Testis
ENST00000623115 0.793±0.00 0.471±0.00 0.739±0.31 0.623±0.09 0.893±0.00 0.736±0.18 0.358±0.00 2.361±0.10

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008ZL CIL_0008ZL_0001 VISTA 10:48905403-49506260
CIL_00084A CIL_00084A_0001 VISTA 10:49095759-49697208
CIL_0007OS CIL_0007OS_0002 UCNEbase 10:49372114-49500701

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003677 IEA DNA binding
GO:0005524 IEA ATP binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000066807 Ercc6-201 protein_coding Mus_musculus 0 2259

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