C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description:
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000623416 AC011477.2-201 ENSG00000279843 9606 + 19:19835158-19836016 pseudogene

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBrainBreastHeartKidneyOvaryPlacentaTestisENST00000623416
Transcript ID Adrenal Brain Breast Heart Kidney Ovary Placenta Testis
ENST00000623416 0.051±0.00 0.075±0.00 0.069±0.02 0.035±0.00 0.025±0.00 0.275±0.06 0.051±0.00 0.067±0.01

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00064B CIL_00064B_0001 CGP 19:19785839-19894674

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000167565 Zfp712-201 protein_coding Mus_musculus 0 364
ENSMUST00000012725 Zfp273-002 protein_coding Mus_musculus 0 348
ENSMUST00000181391 Zfp273-001 protein_coding Mus_musculus 0 348
ENSMUST00000091481 Zfp72-201 protein_coding Mus_musculus 0 348
ENSMUST00000190566 Zfp708-002 protein_coding Mus_musculus 0 327
ENSMUST00000109742 Zfp708-001 protein_coding Mus_musculus 0 327
ENSMUST00000109743 RSLCAN18-202 protein_coding Mus_musculus 0 327
ENSMUST00000186303 RSLCAN18-001 nonsense_mediated_decay Mus_musculus 0 327
ENSMUST00000185856 RSLCAN18-004 processed_transcript Mus_musculus 0 327
ENSMUST00000180507 Zfp493-003 retained_intron Mus_musculus 0 320
ENSMUST00000164936 Zfp493-001 protein_coding Mus_musculus 0 320
ENSMUST00000183125 Zfp386-002 protein_coding Mus_musculus 0 318
ENSMUST00000073551 Zfp386-001 protein_coding Mus_musculus 0 318
ENSMUST00000091520 Zfp85-201 protein_coding Mus_musculus 0 259
ENSMUST00000144183 Zfp85-001 protein_coding Mus_musculus 0 259
ENSMUST00000039577 Zfp51-201 protein_coding Mus_musculus 0 257
ENSMUST00000045969 Zfp458-201 protein_coding Mus_musculus 0 233
ENSMUST00000079242 Zfp52-201 protein_coding Mus_musculus 0 224
ENSMUST00000076664 Zfp53-201 protein_coding Mus_musculus 0 213
ENSMUST00000181767 Zfp87-001 protein_coding Mus_musculus 0 207
ENSMUST00000137496 Zfp738-001 protein_coding Mus_musculus 0 196
ENSMUST00000092720 5430403G16Rik-001 protein_coding Mus_musculus 0 196
ENSMUST00000112547 4930522L14Rik-002 protein_coding Mus_musculus 1.96182e-44 183
ENSMUST00000180536 Zfp87-003 nonsense_mediated_decay Mus_musculus 7.00649e-44 182
ENSMUST00000108007 Gm20939-201 protein_coding Mus_musculus 2.00386e-43 180
ENSMUST00000163475 2610021A01Rik-001 protein_coding Mus_musculus 3e-37 159
ENSMUST00000187241 Zfp932-201 protein_coding Mus_musculus 4e-36 156
ENSMUST00000112536 Zfp932-003 protein_coding Mus_musculus 4e-36 156
ENSMUST00000112540 Zfp932-001 protein_coding Mus_musculus 4e-36 156
ENSMUST00000172177 Zfp40-201 protein_coding Mus_musculus 9e-33 145
ENSMUST00000140313 Zfp40-002 protein_coding Mus_musculus 9e-33 145
ENSMUST00000037057 Zfp40-001 protein_coding Mus_musculus 9e-33 145
ENSMUST00000112544 Gm15446-001 protein_coding Mus_musculus 7e-29 132
ENSMUST00000109128 Zfp2-001 protein_coding Mus_musculus 2e-28 130
ENSMUST00000116378 Zfp2-002 protein_coding Mus_musculus 2e-28 130
ENSMUST00000109129 Zfp2-005 protein_coding Mus_musculus 2e-28 130
ENSMUST00000098509 AW146154-001 protein_coding Mus_musculus 9e-28 128
ENSMUST00000099449 Zfp808-001 protein_coding Mus_musculus 3e-27 126
ENSMUST00000073312 Zfp760-201 protein_coding Mus_musculus 1e-25 121
ENSMUST00000078257 D130040H23Rik-201 protein_coding Mus_musculus 1e-25 121
ENSMUST00000166837 Gm17067-001 protein_coding Mus_musculus 5e-20 102
ENSMUST00000179175 Gm13247-201 protein_coding Mus_musculus 2e-19 100
ENSMUST00000105735 Gm13247-001 protein_coding Mus_musculus 2e-19 100
ENSMUST00000174407 Zfp141-001 protein_coding Mus_musculus 3e-17 94
ENSMUST00000082203 Zfp934-201 protein_coding Mus_musculus 0.000000000000001 88
ENSMUST00000101547 Zfp934-202 protein_coding Mus_musculus 0.000000000000001 88
ENSMUST00000072829 Zfp936-201 protein_coding Mus_musculus 0.000000000000001 88
ENSMUST00000143639 Zfp932-005 protein_coding Mus_musculus 0.00000000000002 84
ENSMUST00000125213 Zfp932-004 protein_coding Mus_musculus 0.00000000000002 84
ENSMUST00000076195 Zfp935-201 protein_coding Mus_musculus 0.00000000000002 84
ENSMUST00000165956 D3Ertd254e-201 protein_coding Mus_musculus 0.00000000000007 82
ENSMUST00000074295 Zfp942-201 protein_coding Mus_musculus 0.00000000000007 82
ENSMUST00000091879 Zfp942-001 protein_coding Mus_musculus 0.00000000000007 82
ENSMUST00000088787 Zfp948-201 protein_coding Mus_musculus 0.0000000000009 79
ENSMUST00000071804 AI987944-001 protein_coding Mus_musculus 0.0000000000009 79
ENSMUST00000163106 EU599041-201 protein_coding Mus_musculus 0.0000000000009 79
ENSMUST00000173283 Gm7221-001 protein_coding Mus_musculus 0.00000000001 75
ENSMUST00000122407 Gm12591-001 unprocessed_pseudogene Mus_musculus 0.0000000002 71
ENSMUST00000181341 Zfp87-002 protein_coding Mus_musculus 0.0000000002 71
ENSMUST00000107989 Gm3604-201 protein_coding Mus_musculus 0.00000003 64
ENSMUST00000187656 Gm3604-001 protein_coding Mus_musculus 0.00000003 64
ENSMUST00000081022 Zfp28-201 protein_coding Mus_musculus 0.000001 58
ENSMUST00000074941 Zfp35-001 protein_coding Mus_musculus 0.000001 58

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