C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: protein tyrosine phosphatase, non-receptor type 4, a
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSDARG00000000631 ptpn4a 7955 - 9:29973993-30062951 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSDART00000000670 ptpn4a-201 29975916-30036561 protein_coding
  ENSDART00000078823 ptpn4a-001 29973993-30023957 protein_coding
  ENSDART00000151941 ptpn4a-002 30036403-30062951 protein_coding

Danio rerio EnsemblZv9

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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyLiverMuscleENSDART00000000670ENSDART00000078823
Transcript ID Brain Heart Kidney Liver Muscle
ENSDART00000000670 2.710±0.00 N/A N/A 0.616±0.00 N/A
ENSDART00000078823 5.533±1.97 6.486±5.18 7.507±2.31 1.322±0.00 1.862±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003WE CIL_0003WE_0001 CGP 9:29904006-30062951
CIL_0001TM CIL_0001TM_0001 CGP 9:29973993-30072814

Gene Ontology
GO IDEvidence TypeGO Description
GO:0004721 IEA phosphoprotein phosphatase activity
GO:0004725 IEA protein tyrosine phosphatase activity
GO:0005515 IEA protein binding
GO:0005737 IEA cytoplasm
GO:0005856 IEA cytoskeleton
GO:0006470 IEA protein dephosphorylation
GO:0008092 IEA cytoskeletal protein binding
GO:0016311 IEA dephosphorylation
GO:0016787 IEA hydrolase activity
GO:0016791 IEA phosphatase activity

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000088179 PTPN4 protein tyrosine phosphatase, non-receptor type 4 (megakaryocyte) protein_coding Homo_sapiens
ENSMUSG00000026384 Ptpn4 protein tyrosine phosphatase, non-receptor type 4 protein_coding Mus_musculus

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