C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: protein tyrosine phosphatase, non-receptor type 4, a
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSDART00000078823 ptpn4a-001 ENSDARG00000000631 7955 - 9:29973993-30023957 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyLiverMuscleENSDART00000078823
Transcript ID Brain Heart Kidney Liver Muscle
ENSDART00000078823 5.533±1.97 6.486±5.18 7.507±2.31 1.322±0.00 1.862±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003WE CIL_0003WE_0001 CGP 9:29904006-30062951
CIL_0001TM CIL_0001TM_0001 CGP 9:29973993-30072814

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004725 IEA protein tyrosine phosphatase activity
GO:0005515 IEA protein binding
GO:0005856 IEA cytoskeleton
GO:0006470 IEA protein dephosphorylation
GO:0008092 IEA cytoskeletal protein binding
GO:0016311 IEA dephosphorylation
GO:0016791 IEA phosphatase activity

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000263708 PTPN4-001 protein_coding Homo_sapiens 0 523
ENST00000430976 PTPN4-002 nonsense_mediated_decay Homo_sapiens 0 523

Loading