C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: iroquois homeobox protein 2, a
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSDARG00000001785 irx2a 7955 - 16:565648-570195 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSDART00000016303 irx2a-001 565648-570195 protein_coding
  ENSDART00000148452 irx2a-003 566629-567534 protein_coding
  ENSDART00000148602 irx2a-002 567672-569146 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyLiverMuscleENSDART00000016303ENSDART00000148452ENSDART00000148602
Transcript ID Brain Heart Kidney Liver Muscle
ENSDART00000016303 2.370±1.71 10.571±12.71 2.121±1.25 N/A 0.437±0.00
ENSDART00000148452 0.944±0.00 N/A N/A N/A N/A
ENSDART00000148602 N/A N/A N/A 0.086±0.00 N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007OW CIL_0007OW_0004 UCNEbase 16:429462-1090747

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003677 IEA DNA binding
GO:0003700 IEA sequence-specific DNA binding transcription factor activity
GO:0005634 IEA nucleus
GO:0006355 IEA regulation of transcription, DNA-dependent
GO:0043565 IEA sequence-specific DNA binding
GO:0060042 IMP retina morphogenesis in camera-type eye

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000170561 IRX2 iroquois homeobox 2 protein_coding Homo_sapiens
ENSMUSG00000001504 Irx2 Iroquois related homeobox 2 (Drosophila) protein_coding Mus_musculus

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