C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: iroquois homeobox 2
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000170561 IRX2 9606 - 5:2745845-2751662 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000302057 IRX2-002 2746766-2751655 protein_coding
  ENST00000382611 IRX2-001 2745845-2751662 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000302057ENST00000382611
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000302057 0.391±0.00 N/A 1.028±0.00 0.048±0.00 0.294±0.00 N/A 0.956±0.79 3.234±0.00 N/A 1.471±0.00 0.032±0.00 0.102±0.09 3.493±1.05 0.950±0.00
ENST00000382611 0.920±0.00 0.085±0.00 N/A 0.072±0.00 3.689±0.00 0.096±0.00 1.376±1.35 8.025±0.00 0.019±0.00 3.378±0.00 N/A 0.205±0.20 6.297±3.56 1.021±0.63

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007OW CIL_0007OW_0001 UCNEbase 5:2112412-4025148

Gene Ontology
GO IDEvidence TypeGO Description
GO:0001656 IEA metanephros development
GO:0003677 IEA DNA binding
GO:0005634 IEA nucleus
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0043565 IEA sequence-specific DNA binding
GO:0072086 IEA specification of loop of Henle identity
GO:0072272 IEA proximal/distal pattern formation involved in metanephric nephron development

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000001785 irx2a iroquois homeobox protein 2, a protein_coding Danio_rerio
ENSMUSG00000001504 Irx2 Iroquois related homeobox 2 (Drosophila) protein_coding Mus_musculus

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