C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: sodium channel modifier 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSDARG00000003027 scnm1 7955 - 16:31931571-31936226 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSDART00000004284 scnm1-001 31931895-31936210 protein_coding
  ENSDART00000132351 scnm1-002 31931571-31936202 protein_coding
  ENSDART00000133965 scnm1-003 31935722-31936226 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyLiverMuscleENSDART00000004284ENSDART00000132351
Transcript ID Brain Heart Kidney Liver Muscle
ENSDART00000004284 2.440±0.81 1.518±0.97 3.394±2.17 0.253±0.00 0.380±0.00
ENSDART00000132351 1.441±0.78 0.469±0.12 N/A 0.130±0.00 N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003MO CIL_0003MO_0001 CGP 16:31896712-31936226
CIL_0000UG CIL_0000UG_0001 CGP 16:31931571-31942803

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005634 IEA nucleus
GO:0006397 IEA mRNA processing
GO:0008380 IEA RNA splicing
GO:0016607 IEA nuclear speck
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000163156 SCNM1 sodium channel modifier 1 protein_coding Homo_sapiens
ENSMUSG00000092607 Scnm1 sodium channel modifier 1 protein_coding Mus_musculus

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