C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: ryanodine receptor 2b (cardiac)
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSDARG00000003706 ryr2b 7955 - 17:19844156-19948292 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSDART00000026272 ryr2b-201 19846874-19858637 protein_coding
  ENSDART00000149737 ryr2b-001 19844156-19948292 protein_coding

Danio rerio EnsemblZv9

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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyLiverMuscleENSDART00000026272ENSDART00000149737
Transcript ID Brain Heart Kidney Liver Muscle
ENSDART00000026272 0.111±0.04 41.297±0.00 N/A N/A 0.185±0.00
ENSDART00000149737 0.028±0.01 29.512±19.78 0.116±0.01 0.017±0.00 0.009±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000LI CIL_0000LI_0001 CGP 17:19661829-19948292

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003677 IEA DNA binding
GO:0005216 IEA ion channel activity
GO:0005219 IEA ryanodine-sensitive calcium-release channel activity
GO:0005262 IEA calcium channel activity
GO:0005509 IEA calcium ion binding
GO:0005515 IEA protein binding
GO:0006355 IEA regulation of transcription, DNA-dependent
GO:0006811 IEA ion transport
GO:0006874 IEA cellular calcium ion homeostasis
GO:0016020 IEA membrane
GO:0016021 IEA integral to membrane
GO:0055085 IEA transmembrane transport
GO:0070588 IEA calcium ion transmembrane transport

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000198626 RYR2 ryanodine receptor 2 (cardiac) protein_coding Homo_sapiens
ENSMUSG00000021313 Ryr2 ryanodine receptor 2, cardiac protein_coding Mus_musculus

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