C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ryanodine receptor 2b (cardiac)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSDART00000149737 ryr2b-001 ENSDARG00000003706 7955 - 17:19844156-19948292 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyLiverMuscleENSDART00000149737
Transcript ID Brain Heart Kidney Liver Muscle
ENSDART00000149737 0.028±0.01 29.512±19.78 0.116±0.01 0.017±0.00 0.009±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000LI CIL_0000LI_0001 CGP 17:19661829-19948292

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003677 IEA DNA binding
GO:0005216 IEA ion channel activity
GO:0005219 IEA ryanodine-sensitive calcium-release channel activity
GO:0005262 IEA calcium channel activity
GO:0005509 IEA calcium ion binding
GO:0005515 IEA protein binding
GO:0006355 IEA regulation of transcription, DNA-dependent
GO:0006811 IEA ion transport
GO:0006874 IEA cellular calcium ion homeostasis
GO:0016020 IEA membrane
GO:0016021 IEA integral to membrane
GO:0055085 IEA transmembrane transport
GO:0070588 IEA calcium ion transmembrane transport

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000021750 Ryr2-201 protein_coding Mus_musculus 0 793
ENSMUST00000170156 Ryr2-202 protein_coding Mus_musculus 0 793
ENST00000355481 RYR1-001 protein_coding Homo_sapiens 0 405
ENST00000359596 RYR1-010 protein_coding Homo_sapiens 0 405
ENST00000360064 RYR2-201 protein_coding Homo_sapiens 0 863
ENST00000360985 RYR1-201 protein_coding Homo_sapiens 0 405
ENST00000366574 RYR2-001 protein_coding Homo_sapiens 0 863
ENST00000389232 RYR3-001 protein_coding Homo_sapiens 0 582
ENST00000415757 RYR3-002 protein_coding Homo_sapiens 0 582
ENST00000593322 RYR1-008 nonsense_mediated_decay Homo_sapiens 0 366
ENST00000594335 RYR1-002 nonsense_mediated_decay Homo_sapiens 0 444
ENST00000609119 RYR2-006 processed_transcript Homo_sapiens 0 832
ENST00000622037 RYR3-201 protein_coding Homo_sapiens 0 582

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