C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: sine oculis homeobox homolog 4a
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSDARG00000004695 six4a 7955 - 13:31860330-31870925 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSDART00000125987 six4a-201 31860330-31870591 protein_coding
  ENSDART00000135381 six4a-001 31860334-31870925 protein_coding
  ENSDART00000143903 six4a-002 31860334-31870608 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyMuscleENSDART00000125987ENSDART00000135381ENSDART00000143903
Transcript ID Brain Heart Kidney Muscle
ENSDART00000125987 0.056±0.02 0.034±0.01 0.128±0.00 9.764±0.00
ENSDART00000135381 N/A N/A N/A 2.931±0.00
ENSDART00000143903 0.016±0.00 N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006SM CIL_0006SM_0001 CGP 13:31843563-31870925
CIL_0006SL CIL_0006SL_0001 CGP 13:31860330-31905553

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003677 IEA DNA binding
GO:0003700 IEA sequence-specific DNA binding transcription factor activity
GO:0005634 IEA nucleus
GO:0006355 IEA regulation of transcription, DNA-dependent
GO:0043565 IEA sequence-specific DNA binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000100625 SIX4 SIX homeobox 4 protein_coding Homo_sapiens
ENSMUSG00000034460 Six4 sine oculis-related homeobox 4 protein_coding Mus_musculus

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