C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: melanoma cell adhesion molecule b
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSDARG00000005368 mcamb 7955 - 15:22625410-22696300 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSDART00000020425 mcamb-001 22625410-22696300 protein_coding
  ENSDART00000115362 mcamb-201 22625412-22696183 protein_coding

Danio rerio EnsemblZv9

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Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyLiverMuscleENSDART00000020425ENSDART00000115362
Transcript ID Brain Heart Kidney Liver Muscle
ENSDART00000020425 6.184±0.11 19.095±3.60 0.944±0.00 0.227±0.00 6.772±0.00
ENSDART00000115362 8.652±4.40 30.995±16.42 2.548±0.07 N/A 3.925±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000220 CIL_000220_0001 CGP 15:22561590-22696300
CIL_000221 CIL_000221_0001 CGP 15:22625410-22712355

Gene Ontology
GO IDEvidence TypeGO Description
GO:0001525 IMP angiogenesis
GO:0001568 IMP blood vessel development
GO:0005515 IEA protein binding
GO:0016020 IEA membrane
GO:0016021 IEA integral to membrane

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000076706 MCAM melanoma cell adhesion molecule protein_coding Homo_sapiens
ENSMUSG00000032135 Mcam melanoma cell adhesion molecule protein_coding Mus_musculus

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