C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_000220_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000009958-ENSDARG00000005368 CGP 7955 15:22561590-22696300
GeneTranscriptPositionBiotype
ENSDARG00000005368 (mcamb)
melanoma cell adhesion molecule b 		ENSDART00000020425 (mcamb-001) 22625410-22696300 protein_coding
ENSDART00000115362 (mcamb-201) 22625412-22696183 protein_coding
ENSDARG00000009958 (cbl)
Cas-Br-M (murine) ecotropic retroviral transforming sequence 		ENSDART00000006085 (cbl-001) 22561590-22618953 protein_coding
ENSDART00000130728 (cbl-201) 22561930-22621848 protein_coding

Danio rerio Ensembl (Zv9)

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CIL_000220_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000110395-ENSG00000076706 CGP 9606 11:119206042-119321521
GeneTranscriptPositionBiotype
ENSG00000076706 (MCAM)
melanoma cell adhesion molecule 		ENST00000264036 (MCAM-001) 119308529-119317116 protein_coding
ENST00000524940 (MCAM-005) 119309887-119311118 processed_transcript
ENST00000525555 (MCAM-009) 119314870-119317130 processed_transcript
ENST00000525586 (MCAM-002) 119308986-119318377 retained_intron
ENST00000526190 (MCAM-007) 119314722-119317130 retained_intron
ENST00000526992 (MCAM-018) 119314990-119315820 processed_transcript
ENST00000528502 (MCAM-011) 119314692-119317130 processed_transcript
ENST00000528533 (MCAM-003) 119308972-119317130 retained_intron
ENST00000528976 (MCAM-016) 119309987-119311381 processed_transcript
ENST00000529257 (MCAM-017) 119314502-119316066 processed_transcript
ENST00000529295 (MCAM-013) 119314505-119316842 processed_transcript
ENST00000529686 (MCAM-010) 119314694-119317130 processed_transcript
ENST00000530006 (MCAM-006) 119314616-119317129 retained_intron
ENST00000530144 (MCAM-014) 119314893-119321521 processed_transcript
ENST00000530706 (MCAM-012) 119312872-119317130 processed_transcript
ENST00000530937 (MCAM-008) 119314685-119317130 retained_intron
ENST00000534522 (MCAM-015) 119314887-119318891 processed_transcript
ENSG00000110395 (CBL)
Cbl proto-oncogene, E3 ubiquitin protein ligase 		ENST00000264033 (CBL-001) 119206042-119308149 protein_coding
ENSG00000222249 (RNU6-262P)
RNA, U6 small nuclear 262, pseudogene 		ENST00000410317 (RNU6-262P-201) 119289562-119289677 snRNA

Homo sapiens Ensembl (GRCh38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_000220_0001ENSDARG00000005368ENSDART00000020425ENSDART00000115362ENSDARG00000009958ENSDART00000006085ENSDART00000130728CIL_000220_0002ENSG00000076706ENST00000264036ENST00000524940ENST00000525555ENST00000525586ENST00000526190ENST00000526992ENST00000528502ENST00000528533ENST00000528976ENST00000529257ENST00000529295ENST00000529686ENST00000530006ENST00000530144ENST00000530706ENST00000530937ENST00000534522ENSG00000110395ENST00000264033ENSG00000222249ENST00000410317
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_000220_0001ENSDARG00000005368ENSDART00000020425ENSDART00000115362ENSDARG00000009958ENSDART00000006085ENSDART00000130728CIL_000220_0002ENSG00000076706ENST00000264036ENST00000528533ENSG00000110395ENST00000264033ENSG00000222249ENST00000410317
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000005368 ENSDART00000020425 N/A N/A N/A 6.184±0.11 N/A N/A 19.095±3.60 0.944±0.00 0.227±0.00 N/A 6.772±0.00 N/A N/A N/A
ENSDART00000115362 N/A N/A N/A 8.652±4.40 N/A N/A 30.995±16.42 2.548±0.07 N/A N/A 3.925±0.00 N/A N/A N/A
ENSDARG00000009958 ENSDART00000006085 N/A N/A N/A N/A N/A N/A 2.511±0.00 N/A 0.128±0.00 N/A 2.471±0.00 N/A N/A N/A
ENSDART00000130728 N/A N/A N/A N/A N/A N/A 3.548±0.70 12.039±1.78 0.393±0.00 N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000076706 ENST00000264036 126.097±0.00 84.315±0.00 0.423±0.00 16.583±13.01 145.454±132.30 40.607±33.92 13.980±9.89 11.341±10.76 16.244±14.06 72.132±62.26 10.787±6.71 27.018±15.24 114.487±23.21 37.284±34.24
ENST00000524940 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000525555 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000525586 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000526190 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000526992 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000528502 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000528533 N/A N/A N/A 6.130±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 12.913±0.00 1.335±0.00
ENST00000528976 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000529257 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000529295 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000529686 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000530006 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000530144 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000530706 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000530937 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000534522 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000110395 ENST00000264033 5.652±0.00 3.095±0.00 1.300±0.00 2.354±0.46 2.180±0.82 2.763±0.10 1.051±0.37 1.677±0.43 0.902±0.09 3.038±0.59 0.750±0.33 2.092±1.11 2.098±0.34 11.358±0.52
ENSG00000222249 ENST00000410317 N/A 0.669±0.00 20.461±0.00 N/A 0.329±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A

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