C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: calcium channel, voltage-dependent, L type, alpha 1C subunit
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSDARG00000008398 cacna1c 7955 + 4:19253817-19410662 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSDART00000028856 cacna1c-201 19253817-19410647 protein_coding
  ENSDART00000132909 cacna1c-001 19253817-19410662 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyMuscleENSDART00000028856ENSDART00000132909
Transcript ID Brain Heart Kidney Muscle
ENSDART00000028856 1.011±0.23 N/A 0.161±0.09 N/A
ENSDART00000132909 4.308±1.00 1.464±0.00 N/A 0.403±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003XH CIL_0003XH_0001 CGP 4:19238522-19410662

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003007 IMP heart morphogenesis
GO:0005216 IEA ion channel activity
GO:0005244 IEA voltage-gated ion channel activity
GO:0005245 IEA voltage-gated calcium channel activity
GO:0005262 IEA calcium channel activity
GO:0005891 IEA voltage-gated calcium channel complex
GO:0006810 IEA transport
GO:0006811 IEA ion transport
GO:0006816 IMP calcium ion transport
GO:0008016 IMP regulation of heart contraction
GO:0016020 IEA membrane
GO:0016021 IEA integral to membrane
GO:0034765 IMP regulation of ion transmembrane transport
GO:0048701 IMP embryonic cranial skeleton morphogenesis
GO:0055085 IEA transmembrane transport
GO:0070509 IMP calcium ion import
GO:0070588 IEA calcium ion transmembrane transport

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000151067 CACNA1C calcium channel, voltage-dependent, L type, alpha 1C subunit protein_coding Homo_sapiens
ENSMUSG00000051331 Cacna1c calcium channel, voltage-dependent, L type, alpha 1C subunit protein_coding Mus_musculus

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