C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0003XH_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000045484-ENSDARG00000008398 CGP 7955 4:19238522-19410662
GeneTranscriptPositionBiotype
ENSDARG00000008398 (cacna1c)
calcium channel, voltage-dependent, L type, alpha 1C subunit 		ENSDART00000028856 (cacna1c-201) 19253817-19410647 protein_coding
ENSDART00000132909 (cacna1c-001) 19253817-19410662 protein_coding
ENSDARG00000045484 (dcp1b)
DCP1 decapping enzyme homolog B (S. cerevisiae) 		ENSDART00000066894 (dcp1b-201) 19238522-19250439 protein_coding
ENSDART00000136350 (dcp1b-001) 19239086-19249500 protein_coding
CIL_0003XH_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000151065-ENSG00000151067 CGP 9606 12:1946054-2697950
GeneTranscriptPositionBiotype
ENSG00000151065 (DCP1B)
decapping mRNA 1B 		ENST00000280665 (DCP1B-002) 1946054-2004511 protein_coding
ENST00000535873 (DCP1B-001) 1991456-2004535 protein_coding
ENST00000536665 (DCP1B-005) 1952777-1966141 processed_transcript
ENST00000537725 (DCP1B-004) 1961316-2004427 processed_transcript
ENST00000540622 (DCP1B-007) 1950036-1967910 protein_coding
ENST00000541700 (DCP1B-006) 1952777-2004467 processed_transcript
ENST00000543381 (DCP1B-003) 1946152-2004470 nonsense_mediated_decay
ENSG00000203593 (RP5-1096D14.6)
 ENST00000354425 (RP5-1096D14.6-001) 2004666-2011392 antisense
ENSG00000203648 (AC007618.3)
 ENST00000366455 (AC007618.3-001) 2659937-2660969 processed_pseudogene
ENSG00000256025 (CACNA1C-AS4)
CACNA1C antisense RNA 4 		ENST00000544415 (CACNA1C-AS4-001) 2220537-2223479 antisense
ENSG00000256257 (CACNA1C-IT2)
CACNA1C intronic transcript 2 (non-protein coding) 		ENST00000541871 (CACNA1C-IT2-001) 2048352-2049463 sense_intronic
ENSG00000256721 (CACNA1C-IT3)
CACNA1C intronic transcript 3 (non-protein coding) 		ENST00000542680 (CACNA1C-IT3-001) 2269776-2288937 sense_intronic
ENSG00000256769 (CACNA1C-AS3)
CACNA1C antisense RNA 3 		ENST00000543559 (CACNA1C-AS3-001) 2603350-2607440 antisense
ENSG00000256837 (CACNA1C-IT1)
CACNA1C intronic transcript 1 (non-protein coding) 		ENST00000542984 (CACNA1C-IT1-001) 2018213-2020532 sense_intronic
ENSG00000278255 (RP1-53O8.2)
 ENST00000613391 (RP1-53O8.2-001) 2217462-2217920 antisense

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0003XH_0001ENSDARG00000008398ENSDART00000028856ENSDART00000132909ENSDARG00000045484ENSDART00000066894ENSDART00000136350CIL_0003XH_0002ENSG00000151065ENST00000280665ENST00000535873ENST00000536665ENST00000537725ENST00000540622ENST00000541700ENST00000543381ENSG00000203593ENST00000354425ENSG00000203648ENST00000366455ENSG00000256025ENST00000544415ENSG00000256257ENST00000541871ENSG00000256721ENST00000542680ENSG00000256769ENST00000543559ENSG00000256837ENST00000542984ENSG00000278255ENST00000613391
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0003XH_0001ENSDARG00000008398ENSDART00000028856ENSDART00000132909ENSDARG00000045484ENSDART00000066894CIL_0003XH_0002ENSG00000151065ENST00000280665ENST00000535873ENST00000536665ENST00000537725ENST00000540622ENST00000543381ENSG00000203593ENST00000354425ENSG00000203648ENST00000366455ENSG00000256025ENST00000544415ENSG00000256257ENST00000541871ENSG00000256721ENST00000542680ENSG00000256769ENST00000543559ENSG00000256837ENST00000542984ENSG00000278255ENST00000613391
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000008398 ENSDART00000028856 N/A N/A N/A 1.011±0.23 N/A N/A N/A 0.161±0.09 N/A N/A N/A N/A N/A N/A
ENSDART00000132909 N/A N/A N/A 4.308±1.00 N/A N/A 1.464±0.00 N/A N/A N/A 0.403±0.00 N/A N/A N/A
ENSDARG00000045484 ENSDART00000066894 N/A N/A N/A 1.359±0.71 N/A N/A 10.529±7.23 2.616±0.00 0.755±0.00 N/A 2.381±0.00 N/A N/A N/A
ENSDART00000136350 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000151065 ENST00000280665 2.223±0.00 2.150±0.00 0.961±0.00 1.729±0.46 1.709±1.46 3.588±2.12 N/A 2.254±1.38 1.624±0.33 3.832±0.00 2.466±1.00 5.645±2.57 3.053±0.70 13.611±0.71
ENST00000535873 N/A N/A 0.500±0.00 0.329±0.09 0.738±0.52 0.708±0.00 0.367±0.00 0.573±0.15 3.411±0.00 0.972±0.00 N/A 0.782±0.05 N/A N/A
ENST00000536665 N/A N/A N/A N/A N/A 2.355±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000537725 N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.948±0.00 N/A N/A N/A N/A
ENST00000540622 N/A N/A 0.810±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 3.557±0.00
ENST00000541700 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000543381 N/A N/A N/A N/A N/A N/A 0.248±0.00 N/A N/A N/A 1.691±0.00 N/A 0.830±0.00 N/A
ENSG00000203593 ENST00000354425 0.049±0.00 0.470±0.00 0.309±0.00 0.175±0.10 0.445±0.00 0.387±0.00 0.421±0.00 0.322±0.00 0.048±0.00 0.158±0.10 0.117±0.00 0.082±0.00 0.028±0.00 0.519±0.19
ENSG00000203648 ENST00000366455 N/A 0.018±0.00 N/A 0.083±0.07 0.106±0.00 0.182±0.03 0.094±0.05 N/A 0.206±0.00 0.016±0.00 0.031±0.00 N/A 0.087±0.00 0.058±0.00
ENSG00000256025 ENST00000544415 N/A N/A N/A N/A 0.017±0.00 N/A N/A N/A N/A N/A N/A 0.684±0.00 N/A 0.211±0.20
ENSG00000256257 ENST00000541871 N/A N/A N/A 0.061±0.00 N/A N/A 0.898±0.61 N/A N/A N/A N/A N/A N/A 0.060±0.00
ENSG00000256721 ENST00000542680 N/A 0.026±0.00 N/A 0.106±0.05 N/A N/A 0.124±0.00 N/A N/A 0.151±0.00 N/A N/A N/A 2.025±0.22
ENSG00000256769 ENST00000543559 N/A N/A N/A N/A 1.343±0.00 N/A 0.226±0.11 N/A 0.208±0.00 N/A N/A N/A N/A 0.124±0.00
ENSG00000256837 ENST00000542984 N/A N/A N/A N/A N/A N/A 0.441±0.00 N/A 0.476±0.00 N/A N/A N/A N/A 0.048±0.00
ENSG00000278255 ENST00000613391 N/A 0.097±0.00 N/A 0.071±0.00 1.211±0.00 N/A N/A 0.907±0.00 N/A 1.243±0.00 N/A 1.458±0.00 N/A 0.236±0.17

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