C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: SRY-box containing gene 21 b
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSDARG00000008540 sox21b 7955 + 9:55102198-55103564 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSDART00000003310 sox21b-001 55102198-55103564 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyMuscleENSDART00000003310
Transcript ID Brain Heart Kidney Muscle
ENSDART00000003310 5.832±1.76 0.053±0.00 0.064±0.00 0.388±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007KH CIL_0007KH_0003 UCNEbase 9:54990397-55145709

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000122 ISS negative regulation of transcription from RNA polymerase II promoter
GO:0002088 IMP lens development in camera-type eye
GO:0003677 IEA DNA binding
GO:0005634 IEA nucleus
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IEA regulation of transcription, DNA-dependent
GO:0043565 ISS sequence-specific DNA binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000125285 SOX21 SRY (sex determining region Y)-box 21 protein_coding Homo_sapiens
ENSMUSG00000061517 Sox21 SRY (sex determining region Y)-box 21 protein_coding Mus_musculus

Loading