C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSDARG00000008904 smarca2 7955 + 5:46757516-46902718 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSDART00000041412 smarca2-001 46757516-46902718 protein_coding
  ENSDART00000113738 smarca2-003 46757778-46806873 protein_coding
  ENSDART00000136002 smarca2-002 46757566-46801956 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyLiverMuscleENSDART00000041412
Transcript ID Brain Heart Kidney Liver Muscle
ENSDART00000041412 5.020±4.44 11.815±4.04 4.687±3.07 1.091±0.00 2.396±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000643 CIL_000643_0001 CGP 5:46626544-46902718

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003676 IEA nucleic acid binding
GO:0003677 IEA DNA binding
GO:0004386 IEA helicase activity
GO:0005515 IEA protein binding
GO:0005524 IEA ATP binding
GO:0005634 IEA nucleus
GO:0006355 IEA regulation of transcription, DNA-dependent
GO:0016817 IEA hydrolase activity, acting on acid anhydrides
GO:0016818 IEA hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000080503 SMARCA2 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2 protein_coding Homo_sapiens
ENSMUSG00000024921 Smarca2 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2 protein_coding Mus_musculus

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