C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: myocyte enhancer factor 2cb
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSDARG00000009418 mef2cb 7955 - 5:49966161-50043000 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSDART00000044083 mef2cb-201 49966161-50042936 protein_coding
  ENSDART00000135911 mef2cb-001 49966176-50043000 protein_coding
  ENSDART00000138702 mef2cb-002 50037192-50042987 processed_transcript

Danio rerio EnsemblZv9

Genome
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Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyLiverMuscleENSDART00000044083ENSDART00000135911ENSDART00000138702
Transcript ID Brain Heart Kidney Liver Muscle
ENSDART00000044083 4.358±1.15 N/A N/A 0.131±0.00 4.042±0.00
ENSDART00000135911 N/A 0.880±0.00 N/A N/A N/A
ENSDART00000138702 5.428±0.28 3.982±1.09 2.369±0.59 0.118±0.00 N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005KE CIL_0005KE_0001 CGP 5:49810772-50043000
CIL_0007M9 CIL_0007M9_0004 UCNEbase 5:49916006-50254911

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003143 IMP embryonic heart tube morphogenesis
GO:0003677 IEA DNA binding
GO:0005634 IEA nucleus
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IEA regulation of transcription, DNA-dependent
GO:0007507 IGI heart development
GO:0046983 IEA protein dimerization activity
GO:0055007 IGI cardiac muscle cell differentiation
GO:0055013 IGI cardiac muscle cell development
GO:0060914 IGI heart formation

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000081189 MEF2C myocyte enhancer factor 2C protein_coding Homo_sapiens
ENSMUSG00000005583 Mef2c myocyte enhancer factor 2C protein_coding Mus_musculus

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