C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: TIA1 cytotoxic granule-associated RNA binding protein-like 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSDARG00000009525 tial1 7955 - 13:25695895-25708642 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSDART00000022799 tial1-001 25695895-25708642 protein_coding
  ENSDART00000131403 tial1-005 25697919-25700810 protein_coding
  ENSDART00000133619 tial1-004 25697096-25701260 retained_intron
  ENSDART00000135321 tial1-002 25697113-25708549 protein_coding
  ENSDART00000147774 tial1-003 25702536-25708623 retained_intron

Danio rerio EnsemblZv9

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Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyLiverMuscleENSDART00000022799ENSDART00000133619ENSDART00000135321
Transcript ID Brain Heart Kidney Liver Muscle
ENSDART00000022799 26.081±12.63 9.409±1.17 8.625±0.00 0.905±0.00 9.209±0.00
ENSDART00000133619 N/A 11.700±0.00 N/A N/A N/A
ENSDART00000135321 N/A 8.771±0.00 N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004GP CIL_0004GP_0001 CGP 13:25695895-25722551

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000166 IEA nucleotide binding
GO:0003676 IEA nucleic acid binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000151923 TIAL1 TIA1 cytotoxic granule-associated RNA binding protein-like 1 protein_coding Homo_sapiens
ENSMUSG00000030846 Tial1 Tia1 cytotoxic granule-associated RNA binding protein-like 1 protein_coding Mus_musculus

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