C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary

CIL_0004GP_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000009525-ENSDARG00000039486 CGP 7955 13:25695895-25722551
GeneTranscriptPositionBiotype
ENSDARG00000009525 (tial1)
TIA1 cytotoxic granule-associated RNA binding protein-like 1
ENSDART00000022799 (tial1-001) 25695895-25708642 protein_coding
ENSDART00000131403 (tial1-005) 25697919-25700810 protein_coding
ENSDART00000133619 (tial1-004) 25697096-25701260 retained_intron
ENSDART00000135321 (tial1-002) 25697113-25708549 protein_coding
ENSDART00000147774 (tial1-003) 25702536-25708623 retained_intron
ENSDARG00000039486 (bag3)
BCL2-associated athanogene 3
ENSDART00000057689 (bag3-001) 25710498-25722551 protein_coding
CIL_0004GP_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000151923-ENSG00000151929 CGP 9606 10:119571802-119677819
GeneTranscriptPositionBiotype
ENSG00000151929 (BAG3)
BCL2-associated athanogene 3
ENST00000369085 (BAG3-001) 119651370-119677819 protein_coding
ENST00000450186 (BAG3-002) 119656610-119676707 protein_coding
ENSG00000227437 (RP11-179H18.5)
ENST00000454541 (RP11-179H18.5-001) 119638456-119639082 processed_pseudogene
ENSG00000234569 (RAD1P1)
RAD1 pseudogene 1
ENST00000231383 (RAD1P1-001) 119621068-119621880 processed_pseudogene
CIL_0004GP_0003 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000030846-ENSMUSG00000030847 CGP 10090 7:128439777-128546977
GeneTranscriptPositionBiotype
ENSMUSG00000030846 (Tial1)
Tia1 cytotoxic granule-associated RNA binding protein-like 1
ENSMUST00000033135 (Tial1-004) 128442280-128461355 protein_coding
ENSMUST00000106226 (Tial1-001) 128439777-128461672 protein_coding
ENSMUST00000106228 (Tial1-006) 128441403-128461209 protein_coding
ENSMUST00000123666 (Tial1-003) 128442280-128461717 nonsense_mediated_decay
ENSMUST00000133089 (Tial1-010) 128443814-128448213 processed_transcript
ENSMUST00000133444 (Tial1-002) 128441403-128461673 processed_transcript
ENSMUST00000136782 (Tial1-009) 128447848-128448878 retained_intron
ENSMUST00000141079 (Tial1-007) 128442267-128461652 retained_intron
ENSMUST00000141126 (Tial1-005) 128442311-128461346 processed_transcript
ENSMUST00000152328 (Tial1-008) 128444289-128445705 retained_intron
ENSMUST00000165023 (Tial1-201) 128441795-128461323 protein_coding
ENSMUSG00000030847 (Bag3)
BCL2-associated athanogene 3
ENSMUST00000033136 (Bag3-201) 128523583-128546977 protein_coding
ENSMUSG00000093125 (Gm24365)
predicted gene, 24365
ENSMUST00000175384 (Gm24365-201) 128478014-128478138 miRNA

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0004GP_0001ENSDARG00000009525ENSDART00000022799ENSDART00000131403ENSDART00000133619ENSDART00000135321ENSDART00000147774ENSDARG00000039486ENSDART00000057689CIL_0004GP_0002ENSG00000151929ENST00000369085ENST00000450186ENSG00000227437ENST00000454541ENSG00000234569ENST00000231383CIL_0004GP_0003ENSMUSG00000030846ENSMUST00000033135ENSMUST00000106226ENSMUST00000106228ENSMUST00000123666ENSMUST00000133089ENSMUST00000133444ENSMUST00000136782ENSMUST00000141079ENSMUST00000141126ENSMUST00000152328ENSMUST00000165023ENSMUSG00000030847ENSMUST00000033136ENSMUSG00000093125ENSMUST00000175384
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0004GP_0001ENSDARG00000009525ENSDART00000022799ENSDART00000133619ENSDART00000135321ENSDARG00000039486ENSDART00000057689CIL_0004GP_0002ENSG00000151929ENST00000369085ENSG00000227437ENST00000454541ENSG00000234569ENST00000231383CIL_0004GP_0003ENSMUSG00000030846ENSMUST00000033135ENSMUST00000106226ENSMUST00000106228ENSMUST00000123666ENSMUST00000133089ENSMUST00000133444ENSMUST00000141079ENSMUST00000141126ENSMUST00000165023ENSMUSG00000030847ENSMUST00000033136ENSMUSG00000093125ENSMUST00000175384
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000009525 ENSDART00000022799 N/A N/A N/A 26.081±12.63 N/A N/A 9.409±1.17 8.625±0.00 0.905±0.00 N/A 9.209±0.00 N/A N/A N/A
ENSDART00000131403 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDART00000133619 N/A N/A N/A N/A N/A N/A 11.700±0.00 N/A N/A N/A N/A N/A N/A N/A
ENSDART00000135321 N/A N/A N/A N/A N/A N/A 8.771±0.00 N/A N/A N/A N/A N/A N/A N/A
ENSDART00000147774 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDARG00000039486 ENSDART00000057689 N/A N/A N/A 9.421±1.00 N/A N/A 71.634±33.06 5.972±3.35 1.329±0.00 N/A 16.431±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000151929 ENST00000369085 18.127±0.00 12.028±0.00 3.890±0.00 16.953±14.91 21.466±16.98 25.474±23.34 21.557±17.59 18.033±0.00 6.360±2.77 30.567±28.14 110.725±68.97 30.489±27.03 39.108±20.13 40.753±12.52
ENST00000450186 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000227437 ENST00000454541 0.146±0.00 0.220±0.00 N/A 0.309±0.00 0.099±0.00 0.091±0.00 N/A 0.033±0.00 N/A N/A 0.225±0.00 0.119±0.03 N/A 0.079±0.03
ENSG00000234569 ENST00000231383 N/A N/A N/A 0.085±0.00 N/A N/A N/A 0.014±0.00 N/A N/A N/A N/A N/A 0.071±0.01
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000030846 ENSMUST00000033135 3.665±0.00 N/A N/A 36.112±0.00 N/A N/A N/A 3.524±0.82 17.727±6.18 N/A 6.732±1.75 67.062±0.00 23.814±22.43 15.132±12.00
ENSMUST00000106226 4.328±1.80 3.503±0.36 N/A 22.401±0.00 3.445±0.63 2.746±0.38 2.044±1.00 3.144±0.31 4.009±0.98 4.533±0.48 2.613±1.04 5.650±1.21 5.442±0.02 1.603±0.16
ENSMUST00000106228 N/A N/A N/A 10.566±0.00 N/A N/A N/A N/A N/A N/A N/A 16.994±0.00 N/A N/A
ENSMUST00000123666 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 6.241±1.93 N/A 3.913±0.55
ENSMUST00000133089 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 13.808±2.66 N/A
ENSMUST00000133444 N/A N/A N/A N/A N/A 1.689±0.03 N/A N/A N/A N/A N/A 4.826±0.59 N/A 2.433±0.43
ENSMUST00000136782 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000141079 10.306±2.11 15.534±5.11 18.935±3.42 25.740±6.88 9.287±0.98 8.754±3.37 6.651±0.77 4.837±0.73 13.298±6.62 9.610±1.36 3.875±0.52 19.875±4.89 8.056±0.94 5.897±0.72
ENSMUST00000141126 N/A N/A N/A N/A 11.915±0.00 N/A 3.668±0.00 N/A N/A N/A N/A N/A N/A 4.600±0.37
ENSMUST00000152328 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000165023 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 4.893±0.00 N/A
ENSMUSG00000030847 ENSMUST00000033136 15.833±1.95 96.717±22.11 17.804±4.57 3.025±2.91 16.738±6.24 23.695±1.17 44.838±13.28 11.079±0.79 7.076±4.47 23.109±1.70 34.330±3.00 30.087±12.40 37.964±25.59 6.788±1.95
ENSMUSG00000093125 ENSMUST00000175384 N/A N/A 24.262±3.66 18.144±0.00 N/A N/A N/A N/A 8.851±0.00 N/A N/A 19.573±0.00 3.696±0.00 N/A

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