C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: ubiquitin protein ligase E3 component n-recognin 4
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSDARG00000009549 ubr4 7955 + 23:21573096-21670989 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSDART00000024846 ubr4-201 21573096-21670509 protein_coding
  ENSDART00000033970 ubr4-001 21573133-21670989 protein_coding
  ENSDART00000131914 ubr4-003 21665378-21668074 retained_intron
  ENSDART00000145151 ubr4-002 21658216-21661363 retained_intron
  ENSDART00000156701 ubr4-202 21573096-21670509 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyLiverMuscleENSDART00000033970ENSDART00000156701
Transcript ID Brain Heart Kidney Liver Muscle
ENSDART00000033970 4.153±1.20 2.148±1.50 1.259±0.00 0.857±0.00 2.083±0.00
ENSDART00000156701 2.126±0.02 1.099±0.00 1.752±0.00 N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003WN CIL_0003WN_0001 CGP 23:21555455-21670989
CIL_0003WQ CIL_0003WQ_0001 CGP 23:21573096-21712014

Gene Ontology
GO IDEvidence TypeGO Description
GO:0004842 IEA ubiquitin-protein ligase activity
GO:0005488 IEA binding
GO:0005515 IEA protein binding
GO:0008270 IEA zinc ion binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000127481 UBR4 ubiquitin protein ligase E3 component n-recognin 4 protein_coding Homo_sapiens
ENSMUSG00000066036 Ubr4 ubiquitin protein ligase E3 component n-recognin 4 protein_coding Mus_musculus

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