C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: poly(A) polymerase alpha
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSDARG00000009585 papola 7955 - 20:4754496-4779853 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSDART00000050201 papola-201 4768707-4779840 protein_coding
  ENSDART00000053858 papola-001 4754496-4779853 protein_coding
  ENSDART00000124899 papola-003 4776334-4779529 processed_transcript
  ENSDART00000125620 papola-002 4768461-4779853 protein_coding
  ENSDART00000152155 papola-005 4770131-4772875 protein_coding
  ENSDART00000152559 papola-004 4772859-4779825 protein_coding

Danio rerio EnsemblZv9

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Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyLiverMuscleENSDART00000053858ENSDART00000125620
Transcript ID Brain Heart Kidney Liver Muscle
ENSDART00000053858 18.365±8.82 16.079±4.44 17.799±4.55 5.907±0.00 5.378±0.00
ENSDART00000125620 16.550±5.32 5.818±2.05 7.024±0.00 N/A 2.930±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003723 IEA RNA binding
GO:0004652 IEA polynucleotide adenylyltransferase activity
GO:0005634 IEA nucleus
GO:0005737 IBA cytoplasm
GO:0006378 IBA mRNA polyadenylation
GO:0016779 IEA nucleotidyltransferase activity
GO:0031123 IEA RNA 3'-end processing
GO:0043631 IEA RNA polyadenylation

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000090060 PAPOLA poly(A) polymerase alpha protein_coding Homo_sapiens
ENSG00000218823 PAPOLB poly(A) polymerase beta (testis specific) protein_coding Homo_sapiens
ENSMUSG00000021111 Papola poly (A) polymerase alpha protein_coding Mus_musculus
ENSMUSG00000074817 Papolb poly (A) polymerase beta (testis specific) protein_coding Mus_musculus

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