C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: cytoplasmic linker associated protein 1a
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSDARG00000010280 clasp1a 7955 + 9:39216185-39344120 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSDART00000102445 clasp1a-201 39220321-39344120 protein_coding
  ENSDART00000131334 clasp1a-002 39331692-39339097 nonsense_mediated_decay
  ENSDART00000137955 clasp1a-001 39216185-39344118 protein_coding
  ENSDART00000142853 clasp1a-003 39325542-39328770 protein_coding

Danio rerio EnsemblZv9

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyLiverMuscleENSDART00000102445ENSDART00000137955
Transcript ID Brain Heart Kidney Liver Muscle
ENSDART00000102445 4.135±0.00 2.001±0.45 3.208±0.53 0.185±0.00 N/A
ENSDART00000137955 3.792±0.00 N/A N/A 0.566±0.00 1.060±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001VI CIL_0001VI_0001 CGP 9:39210879-39344120
CIL_0001QO CIL_0001QO_0001 CGP 9:39216185-39364059

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005488 IEA binding
GO:0005515 IEA protein binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000074054 CLASP1 cytoplasmic linker associated protein 1 protein_coding Homo_sapiens
ENSMUSG00000064302 Clasp1 CLIP associating protein 1 protein_coding Mus_musculus

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