C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 2
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSDARG00000013000 ppfia2 7955 - 4:20898006-21143563 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSDART00000034834 ppfia2-201 20898006-20976569 protein_coding
  ENSDART00000142140 ppfia2-001 20898006-21143563 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyLiverMuscleENSDART00000034834ENSDART00000142140
Transcript ID Brain Heart Kidney Liver Muscle
ENSDART00000034834 5.128±1.26 0.754±0.00 N/A 0.050±0.00 N/A
ENSDART00000142140 9.214±0.00 0.312±0.00 0.229±0.00 N/A 0.626±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000218 CIL_000218_0001 CGP 4:20803212-21143563

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000166 IEA nucleotide binding
GO:0005515 IEA protein binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000139220 PPFIA2 protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 2 protein_coding Homo_sapiens
ENSMUSG00000053825 Ppfia2 protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 2 protein_coding Mus_musculus

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