C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSDART00000142140 ppfia2-001 ENSDARG00000013000 7955 - 4:20898006-21143563 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyMuscleENSDART00000142140
Transcript ID Brain Heart Kidney Muscle
ENSDART00000142140 9.214±0.00 0.312±0.00 0.229±0.00 0.626±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000218 CIL_000218_0001 CGP 4:20803212-21143563

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000166 IEA nucleotide binding
GO:0005515 IEA protein binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000272198 PPFIA4-002 protein_coding Homo_sapiens 0 521
ENST00000295706 PPFIA4-201 protein_coding Homo_sapiens 0 309
ENST00000367240 PPFIA4-001 protein_coding Homo_sapiens 0 521
ENST00000447715 PPFIA4-005 protein_coding Homo_sapiens 0 521
ENST00000486360 PPFIA4-003 retained_intron Homo_sapiens 0 313
ENST00000594656 PPFIA4-011 retained_intron Homo_sapiens 0 279
ENST00000599966 PPFIA4-008 protein_coding Homo_sapiens 0 309
ENST00000600426 PPFIA4-004 protein_coding Homo_sapiens 0 521

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