C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: lysosomal membrane glycoprotein 2
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSDARG00000014914 lamp2 7955 - 14:34448790-34456576 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSDART00000124242 lamp2-001 34449655-34456576 protein_coding
  ENSDART00000132813 lamp2-002 34449072-34453949 protein_coding
  ENSDART00000136441 lamp2-006 34450806-34452718 processed_transcript
  ENSDART00000140001 lamp2-005 34453600-34456497 protein_coding
  ENSDART00000142162 lamp2-003 34448790-34452973 processed_transcript
  ENSDART00000147059 lamp2-004 34449219-34456414 protein_coding

Danio rerio EnsemblZv9

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Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyLiverMuscleENSDART00000124242ENSDART00000140001ENSDART00000147059
Transcript ID Brain Heart Kidney Liver Muscle
ENSDART00000124242 21.017±10.01 38.511±18.63 60.549±15.46 8.935±0.00 17.437±0.00
ENSDART00000140001 N/A 61.114±0.00 N/A N/A N/A
ENSDART00000147059 N/A 24.739±0.00 N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00016Y CIL_00016Y_0001 CGP 14:34433280-34456576
CIL_00016X CIL_00016X_0001 CGP 14:34448790-34480123

Gene Ontology
GO IDEvidence TypeGO Description
GO:0008150 ND biological_process
GO:0016020 IEA membrane

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000005893 LAMP2 lysosomal-associated membrane protein 2 protein_coding Homo_sapiens
ENSMUSG00000016534 Lamp2 lysosomal-associated membrane protein 2 protein_coding Mus_musculus

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