C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: polypyrimidine tract binding protein 2a
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSDARG00000015230 ptbp2a 7955 + 24:31678855-31705272 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSDART00000046928 ptbp2a-201 31678855-31705272 protein_coding
  ENSDART00000123275 ptbp2a-001 31678866-31705105 protein_coding
  ENSDART00000132080 ptbp2a-003 31700715-31703587 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyLiverMuscleENSDART00000046928ENSDART00000123275
Transcript ID Brain Heart Kidney Liver Muscle
ENSDART00000046928 N/A 0.830±0.00 N/A N/A 0.441±0.00
ENSDART00000123275 3.299±2.25 1.734±1.26 2.117±0.00 0.941±0.00 0.949±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007J2 CIL_0007J2_0004 UCNEbase 24:31567679-32405289
CIL_0007C5 CIL_0007C5_0001 CGP 24:31678855-31817408

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000166 IEA nucleotide binding
GO:0003676 IEA nucleic acid binding
GO:0003723 IEA RNA binding
GO:0005634 IEA nucleus
GO:0006397 IEA mRNA processing

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000117569 PTBP2 polypyrimidine tract binding protein 2 protein_coding Homo_sapiens
ENSMUSG00000028134 Ptbp2 polypyrimidine tract binding protein 2 protein_coding Mus_musculus

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