C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: polypyrimidine tract binding protein 2
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000028134 Ptbp2 10090 - 3:119718742-119783388 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000029780 Ptbp2-201 119718742-119783388 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000029780
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000029780 2.635±1.10 2.615±0.32 13.555±3.74 40.882±22.73 1.578±0.54 2.712±0.45 2.429±0.24 1.905±0.45 1.625±0.60 3.013±1.01 2.996±0.68 4.262±0.92 1.393±0.48 15.354±4.95

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00005S CIL_00005S_0002 CGP 3:118562129-119783388
CIL_0007J2 CIL_0007J2_0002 UCNEbase 3:118659230-121102450

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000166 IEA nucleotide binding
GO:0003729 IDA mRNA binding
GO:0005515 IPI protein binding
GO:0005681 IDA spliceosomal complex
GO:0006376 IDA mRNA splice site selection
GO:0033119 IEA negative regulation of RNA splicing
GO:0044822 IEA poly(A) RNA binding
GO:2000177 IMP regulation of neural precursor cell proliferation

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000015230 ptbp2a polypyrimidine tract binding protein 2a protein_coding Danio_rerio
ENSDARG00000015901 ptbp2b polypyrimidine tract binding protein 2b protein_coding Danio_rerio
ENSG00000117569 PTBP2 polypyrimidine tract binding protein 2 protein_coding Homo_sapiens

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