C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0007C5_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000015230-ENSDARG00000086853 CGP 7955 24:31678855-31817408
GeneTranscriptPositionBiotype
ENSDARG00000015230 (ptbp2a)
polypyrimidine tract binding protein 2a 		ENSDART00000046928 (ptbp2a-201) 31678855-31705272 protein_coding
ENSDART00000123275 (ptbp2a-001) 31678866-31705105 protein_coding
ENSDART00000132080 (ptbp2a-003) 31700715-31703587 retained_intron
ENSDARG00000086853 (DPYD (4 of 5))
dihydropyrimidine dehydrogenase 		ENSDART00000124978 (DPYD (4 of 5)-001) 31750590-31817408 protein_coding
CIL_0007C5_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000117569-ENSG00000188641 CGP 9606 1:96721665-97921049
GeneTranscriptPositionBiotype
ENSG00000117569 (PTBP2)
polypyrimidine tract binding protein 2 		ENST00000370197 (PTBP2-004) 96721810-96814793 protein_coding
ENST00000370198 (PTBP2-003) 96721810-96814793 protein_coding
ENST00000426398 (PTBP2-002) 96721822-96814793 protein_coding
ENST00000459735 (PTBP2-010) 96784948-96812928 processed_transcript
ENST00000460706 (PTBP2-009) 96721792-96771475 processed_transcript
ENST00000462433 (PTBP2-011) 96806811-96812928 processed_transcript
ENST00000476419 (PTBP2-008) 96721822-96813488 processed_transcript
ENST00000476783 (PTBP2-006) 96785194-96813447 processed_transcript
ENST00000482253 (PTBP2-005) 96721665-96813711 processed_transcript
ENST00000492905 (PTBP2-007) 96785194-96813447 processed_transcript
ENST00000609116 (PTBP2-001) 96721783-96823738 protein_coding
ENSG00000188641 (DPYD)
dihydropyrimidine dehydrogenase 		ENST00000306031 (DPYD-002) 97719758-97921049 protein_coding
ENST00000370192 (DPYD-001) 97077743-97921023 protein_coding
ENST00000460019 (DPYD-003) 97855030-97920997 processed_transcript
ENST00000474241 (DPYD-004) 97691207-97721654 retained_intron
ENSG00000226128 (RPL26P9)
ribosomal protein L26 pseudogene 9 		ENST00000457466 (RPL26P9-001) 97585862-97586294 processed_pseudogene
ENSG00000228057 (SEC63P1)
SEC63 homolog (S. cerevisiae) pseudogene 1 		ENST00000425785 (SEC63P1-001) 97545701-97546958 processed_pseudogene
ENSG00000230718 (RP11-272L13.2)
 ENST00000441166 (RP11-272L13.2-001) 97774669-97775026 processed_pseudogene
ENSG00000232542 (DPYD-IT1)
DPYD intronic transcript 1 (non-protein coding) 		ENST00000424982 (DPYD-IT1-001) 97394154-97420141 sense_intronic
ENSG00000235777 (DPYD-AS2)
DPYD antisense RNA 2 		ENST00000422259 (DPYD-AS2-002) 97796965-97798066 antisense
ENST00000431362 (DPYD-AS2-001) 97796921-97797868 antisense
ENSG00000265771 (AL592205.2)
 ENST00000577912 (AL592205.2-201) 96935545-96935663 miRNA
ENSG00000270911 (RP11-272L13.4)
 ENST00000604863 (RP11-272L13.4-001) 97855575-97856825 processed_pseudogene

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0007C5_0001ENSDARG00000015230ENSDART00000046928ENSDART00000123275ENSDART00000132080ENSDARG00000086853ENSDART00000124978CIL_0007C5_0002ENSG00000117569ENST00000370197ENST00000370198ENST00000426398ENST00000459735ENST00000460706ENST00000462433ENST00000476419ENST00000476783ENST00000482253ENST00000492905ENST00000609116ENSG00000188641ENST00000306031ENST00000370192ENST00000460019ENST00000474241ENSG00000226128ENST00000457466ENSG00000228057ENST00000425785ENSG00000230718ENST00000441166ENSG00000232542ENST00000424982ENSG00000235777ENST00000422259ENST00000431362ENSG00000265771ENST00000577912ENSG00000270911ENST00000604863
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0007C5_0001ENSDARG00000015230ENSDART00000046928ENSDART00000123275ENSDARG00000086853ENSDART00000124978CIL_0007C5_0002ENSG00000117569ENST00000370197ENST00000370198ENST00000426398ENST00000460706ENST00000462433ENST00000476419ENST00000609116ENSG00000188641ENST00000306031ENST00000370192ENST00000460019ENSG00000226128ENST00000457466ENSG00000228057ENST00000425785ENSG00000230718ENST00000441166ENSG00000232542ENST00000424982ENSG00000235777ENST00000422259ENST00000431362ENSG00000265771ENST00000577912ENSG00000270911ENST00000604863
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000015230 ENSDART00000046928 N/A N/A N/A N/A N/A N/A 0.830±0.00 N/A N/A N/A 0.441±0.00 N/A N/A N/A
ENSDART00000123275 N/A N/A N/A 3.299±2.25 N/A N/A 1.734±1.26 2.117±0.00 0.941±0.00 N/A 0.949±0.00 N/A N/A N/A
ENSDART00000132080 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDARG00000086853 ENSDART00000124978 N/A N/A N/A 0.774±0.50 N/A N/A 1.768±0.70 0.733±0.15 N/A N/A 0.320±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000117569 ENST00000370197 1.368±0.00 N/A N/A 3.422±1.30 1.215±0.54 2.450±0.00 1.281±0.00 N/A N/A 2.166±0.00 1.306±0.00 2.091±0.32 0.299±0.00 4.323±0.59
ENST00000370198 N/A N/A N/A 2.642±0.00 1.277±0.00 N/A 0.728±0.00 1.041±0.00 N/A N/A 1.307±0.00 1.641±0.00 0.346±0.00 N/A
ENST00000426398 1.375±0.00 4.172±0.00 2.119±0.00 6.759±0.73 1.528±0.00 5.041±2.49 1.009±0.00 2.315±1.91 6.940±6.35 0.796±0.00 N/A 2.263±0.91 0.822±0.04 10.218±1.28
ENST00000459735 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000460706 N/A N/A 2.060±0.00 N/A 4.191±0.00 N/A 1.014±0.00 N/A N/A 2.571±0.00 N/A N/A N/A N/A
ENST00000462433 N/A N/A N/A N/A N/A N/A N/A 3.740±0.00 N/A N/A 8.121±0.00 3.978±0.00 1.312±0.00 24.972±0.00
ENST00000476419 N/A N/A N/A N/A N/A N/A 0.619±0.00 N/A N/A N/A 1.145±0.00 N/A N/A N/A
ENST00000476783 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000482253 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000492905 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000609116 N/A N/A N/A 0.653±0.00 0.689±0.00 N/A N/A 0.083±0.00 1.329±0.00 0.285±0.15 0.321±0.15 N/A N/A N/A
ENSG00000188641 ENST00000306031 N/A N/A N/A 0.674±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000370192 8.609±0.00 4.201±0.00 2.688±0.00 0.773±0.25 4.608±0.54 7.048±2.83 2.249±0.70 6.212±0.86 7.441±0.36 7.212±2.03 1.857±0.39 4.245±3.07 1.475±0.45 5.009±0.00
ENST00000460019 N/A N/A 5.911±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000474241 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000226128 ENST00000457466 N/A N/A 0.167±0.00 0.906±0.00 N/A 1.556±0.00 0.235±0.00 1.552±0.00 N/A 0.692±0.00 N/A 0.052±0.00 N/A N/A
ENSG00000228057 ENST00000425785 0.159±0.00 0.105±0.00 0.083±0.00 0.066±0.05 0.055±0.02 0.059±0.04 0.048±0.00 0.038±0.02 0.071±0.02 0.114±0.09 0.008±0.00 0.062±0.03 0.053±0.00 0.077±0.01
ENSG00000230718 ENST00000441166 N/A 0.125±0.00 N/A 0.030±0.00 N/A 0.173±0.00 N/A N/A 0.637±0.00 1.897±0.00 N/A 0.087±0.00 0.056±0.00 N/A
ENSG00000232542 ENST00000424982 0.069±0.00 1.454±0.00 N/A 0.470±0.00 0.645±0.00 0.258±0.00 0.377±0.00 1.713±1.19 0.757±0.70 0.180±0.00 0.237±0.00 0.839±0.00 0.314±0.00 1.369±0.59
ENSG00000235777 ENST00000422259 N/A N/A N/A N/A N/A N/A 0.023±0.00 N/A N/A 0.166±0.09 N/A N/A N/A 0.585±0.39
ENST00000431362 N/A N/A N/A 0.088±0.00 0.122±0.00 0.325±0.00 N/A N/A N/A 0.371±0.00 N/A 0.172±0.00 N/A 0.239±0.00
ENSG00000265771 ENST00000577912 0.245±0.00 0.677±0.00 N/A 0.636±0.00 0.605±0.00 0.592±0.00 0.592±0.00 0.920±0.00 1.879±0.00 N/A 1.472±0.00 7.319±0.00 N/A 0.103±0.00
ENSG00000270911 ENST00000604863 N/A N/A N/A 0.058±0.03 0.134±0.00 0.020±0.00 0.015±0.00 0.496±0.00 0.208±0.00 0.666±0.00 N/A 0.145±0.00 N/A N/A

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