C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: zic family member 2 (odd-paired homolog, Drosophila), a
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSDARG00000015554 zic2a 7955 + 9:32315469-32320318 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSDART00000010774 zic2a-001 32315469-32320318 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyLiverMuscleENSDART00000010774
Transcript ID Brain Heart Kidney Liver Muscle
ENSDART00000010774 121.264±9.54 0.029±0.01 0.037±0.01 0.051±0.00 4.218±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004FV CIL_0004FV_0001 CGP 9:32201019-32347632
CIL_0007LI CIL_0007LI_0003 UCNEbase 9:32223724-32524953
CIL_0004FW CIL_0004FW_0001 CGP 9:32307416-32347632

Gene Ontology
GO IDEvidence TypeGO Description
GO:0001841 IGI neural tube formation
GO:0003676 IEA nucleic acid binding
GO:0008589 IMP regulation of smoothened signaling pathway
GO:0009953 IGI dorsal/ventral pattern formation
GO:0014032 IMP neural crest cell development
GO:0021536 IGI diencephalon development
GO:0021846 IMP cell proliferation in forebrain
GO:0030901 IMP midbrain development
GO:0033278 IMP cell proliferation in midbrain
GO:0042127 IMP regulation of cell proliferation
GO:0045892 IMP negative regulation of transcription, DNA-dependent
GO:0046872 IEA metal ion binding
GO:0048703 IMP embryonic viscerocranium morphogenesis
GO:0060059 IMP embryonic retina morphogenesis in camera-type eye

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000043355 ZIC2 Zic family member 2 protein_coding Homo_sapiens
ENSMUSG00000061524 Zic2 zinc finger protein of the cerebellum 2 protein_coding Mus_musculus

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