C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: polypyrimidine tract binding protein 2b
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSDARG00000015901 ptbp2b 7955 - 2:18274382-18292829 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSDART00000038648 ptbp2b-001 18274382-18292829 protein_coding
  ENSDART00000135075 ptbp2b-003 18276194-18279290 processed_transcript
  ENSDART00000141722 ptbp2b-002 18276205-18285016 nonsense_mediated_decay
  ENSDART00000149789 ptbp2b-004 18278440-18284435 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyLiverMuscleENSDART00000038648ENSDART00000141722
Transcript ID Brain Heart Kidney Liver Muscle
ENSDART00000038648 6.945±2.53 2.947±2.06 0.762±0.00 N/A 0.795±0.00
ENSDART00000141722 N/A N/A N/A 0.332±0.00 N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00005S CIL_00005S_0001 CGP 2:17988789-18292829
CIL_0007J2 CIL_0007J2_0003 UCNEbase 2:17989041-18279338

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000166 IEA nucleotide binding
GO:0003676 IEA nucleic acid binding
GO:0003723 IEA RNA binding
GO:0005634 IEA nucleus
GO:0006397 IEA mRNA processing

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000117569 PTBP2 polypyrimidine tract binding protein 2 protein_coding Homo_sapiens
ENSMUSG00000028134 Ptbp2 polypyrimidine tract binding protein 2 protein_coding Mus_musculus

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