C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: polypyrimidine tract binding protein 2b
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSDART00000038648 ptbp2b-001 ENSDARG00000015901 7955 - 2:18274382-18292829 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyMuscleENSDART00000038648
Transcript ID Brain Heart Kidney Muscle
ENSDART00000038648 6.945±2.53 2.947±2.06 0.762±0.00 0.795±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00005S CIL_00005S_0001 CGP 2:17988789-18292829
CIL_0007J2 CIL_0007J2_0003 UCNEbase 2:17989041-18279338

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000166 IEA nucleotide binding
GO:0003676 IEA nucleic acid binding
GO:0003723 IEA RNA binding
GO:0005634 IEA nucleus
GO:0006397 IEA mRNA processing

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000029780 Ptbp2-201 protein_coding Mus_musculus 0 351
ENST00000334318 PTBP3-201 protein_coding Homo_sapiens 4.2039e-45 189
ENST00000343327 PTBP3-005 protein_coding Homo_sapiens 1.4013e-45 189
ENST00000370197 PTBP2-004 protein_coding Homo_sapiens 0 298
ENST00000370198 PTBP2-003 protein_coding Homo_sapiens 0 313
ENST00000374255 PTBP3-006 protein_coding Homo_sapiens 1.4013e-45 189
ENST00000374257 PTBP3-004 protein_coding Homo_sapiens 2.8026e-45 189
ENST00000426398 PTBP2-002 protein_coding Homo_sapiens 0 313
ENST00000458258 PTBP3-202 protein_coding Homo_sapiens 4.2039e-45 189
ENST00000459735 PTBP2-010 processed_transcript Homo_sapiens 0 241
ENST00000482253 PTBP2-005 processed_transcript Homo_sapiens 0 298
ENST00000609116 PTBP2-001 protein_coding Homo_sapiens 0 298

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