C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: WD repeat and HMG-box DNA binding protein 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSDARG00000015998 wdhd1 7955 - 17:14991018-15030636 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSDART00000002176 wdhd1-201 14991265-15030624 protein_coding
  ENSDART00000110507 wdhd1-202 14991018-15027618 protein_coding
  ENSDART00000133710 wdhd1-001 14991182-15030636 protein_coding
  ENSDART00000138764 wdhd1-004 14991264-15030624 nonsense_mediated_decay
  ENSDART00000151885 wdhd1-002 15025136-15029679 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyLiverMuscleENSDART00000002176ENSDART00000110507ENSDART00000133710ENSDART00000138764ENSDART00000151885
Transcript ID Brain Heart Kidney Liver Muscle
ENSDART00000002176 N/A 0.063±0.00 N/A N/A 0.109±0.00
ENSDART00000110507 0.125±0.03 0.304±0.15 1.676±0.00 N/A 0.064±0.00
ENSDART00000133710 0.366±0.00 N/A 4.098±0.00 0.346±0.00 N/A
ENSDART00000138764 N/A 0.067±0.00 N/A N/A 0.090±0.00
ENSDART00000151885 N/A 0.319±0.00 N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000005 CIL_000005_0001 CGP 17:14963216-15030636
CIL_000603 CIL_000603_0001 CGP 17:14991018-15042270

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005515 IEA protein binding
GO:0005575 ND cellular_component
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000198554 WDHD1 WD repeat and HMG-box DNA binding protein 1 protein_coding Homo_sapiens
ENSMUSG00000037572 Wdhd1 WD repeat and HMG-box DNA binding protein 1 protein_coding Mus_musculus

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