C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: heterogeneous nuclear ribonucleoprotein K
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSDARG00000018914 hnrnpk 7955 - 8:52006517-52027085 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSDART00000097919 hnrnpk-201 52006517-52024948 protein_coding
  ENSDART00000131928 hnrnpk-008 52007076-52016743 processed_transcript
  ENSDART00000132395 hnrnpk-005 52013110-52016812 retained_intron
  ENSDART00000135841 hnrnpk-003 52009255-52010225 retained_intron
  ENSDART00000137941 hnrnpk-006 52017108-52027049 protein_coding
  ENSDART00000140609 hnrnpk-004 52006986-52017015 protein_coding
  ENSDART00000143950 hnrnpk-002 52007165-52010456 retained_intron
  ENSDART00000147151 hnrnpk-007 52017108-52023501 retained_intron
  ENSDART00000147309 hnrnpk-001 52006517-52027085 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyLiverMuscleENSDART00000097919ENSDART00000131928ENSDART00000140609ENSDART00000147309
Transcript ID Brain Heart Kidney Liver Muscle
ENSDART00000097919 14.731±1.48 14.740±9.64 58.940±5.60 N/A 7.495±0.00
ENSDART00000131928 N/A 13.380±0.53 N/A 0.891±0.00 3.699±0.00
ENSDART00000140609 N/A 7.151±0.00 N/A N/A N/A
ENSDART00000147309 21.917±3.94 N/A N/A N/A 2.607±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00007C CIL_00007C_0001 CGP 8:51991007-52027085
CIL_00007B CIL_00007B_0001 CGP 8:52006517-52030831

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003723 IEA RNA binding
GO:0019012 IEA virion
GO:0019013 IEA viral nucleocapsid
GO:0030529 IEA ribonucleoprotein complex

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000165119 HNRNPK heterogeneous nuclear ribonucleoprotein K protein_coding Homo_sapiens
ENSMUSG00000021546 Hnrnpk heterogeneous nuclear ribonucleoprotein K protein_coding Mus_musculus
ENSMUSG00000063902 Gm7964 predicted gene 7964 protein_coding Mus_musculus

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