C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: predicted gene 7964
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000063902 Gm7964 10090 + 7:83755904-83757356 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000042280 Gm7964-201 83755904-83757356 protein_coding
  ENSMUST00000051522 Gm7964-202 83755904-83757356 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000042280ENSMUST00000051522
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000042280 N/A N/A N/A 0.497±0.46 N/A N/A N/A N/A N/A N/A N/A 0.078±0.02 0.139±0.06 0.016±0.00
ENSMUST00000051522 2.828±0.32 1.541±0.58 2.158±1.30 4.416±1.00 1.613±0.48 2.045±1.23 1.864±0.39 2.794±0.65 4.195±1.89 1.774±0.21 0.292±0.11 1.768±0.64 0.875±0.79 2.928±0.15

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0009CN CIL_0009CN_0002 VISTA 7:83511918-84115428

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000790 IEA nuclear chromatin
GO:0000978 IEA RNA polymerase II core promoter proximal region sequence-specific DNA binding
GO:0001077 IEA RNA polymerase II core promoter proximal region sequence-specific DNA binding transcription factor activity involved in positive regulation of transcription
GO:0003723 IEA RNA binding
GO:0005515 IEA protein binding
GO:0005634 IEA nucleus
GO:0005925 IEA focal adhesion
GO:0010988 IEA regulation of low-density lipoprotein particle clearance
GO:0016020 IEA membrane
GO:0044822 IEA poly(A) RNA binding
GO:0045716 IEA positive regulation of low-density lipoprotein particle receptor biosynthetic process
GO:0045944 IEA positive regulation of transcription from RNA polymerase II promoter
GO:0048260 IEA positive regulation of receptor-mediated endocytosis
GO:0070062 IEA extracellular vesicular exosome
GO:0071013 IEA catalytic step 2 spliceosome
GO:0072369 IEA regulation of lipid transport by positive regulation of transcription from RNA polymerase II promoter

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000007034 hnrpkl heterogeneous nuclear ribonucleoprotein K, like protein_coding Danio_rerio
ENSDARG00000018914 hnrnpk heterogeneous nuclear ribonucleoprotein K protein_coding Danio_rerio
ENSDARG00000078787 HNRNPK heterogeneous nuclear ribonucleoprotein K protein_coding Danio_rerio
ENSG00000165119 HNRNPK heterogeneous nuclear ribonucleoprotein K protein_coding Homo_sapiens

Loading