C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_00007B_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000018914-ENSDARG00000041376 CGP 7955 8:52006517-52030831
GeneTranscriptPositionBiotype
ENSDARG00000018914 (hnrnpk)
heterogeneous nuclear ribonucleoprotein K 		ENSDART00000097919 (hnrnpk-201) 52006517-52024948 protein_coding
ENSDART00000131928 (hnrnpk-008) 52007076-52016743 processed_transcript
ENSDART00000132395 (hnrnpk-005) 52013110-52016812 retained_intron
ENSDART00000135841 (hnrnpk-003) 52009255-52010225 retained_intron
ENSDART00000137941 (hnrnpk-006) 52017108-52027049 protein_coding
ENSDART00000140609 (hnrnpk-004) 52006986-52017015 protein_coding
ENSDART00000143950 (hnrnpk-002) 52007165-52010456 retained_intron
ENSDART00000147151 (hnrnpk-007) 52017108-52023501 retained_intron
ENSDART00000147309 (hnrnpk-001) 52006517-52027085 protein_coding
ENSDARG00000041376 (rmi1)
RMI1, RecQ mediated genome instability 1, homolog (S. cerevisiae) 		ENSDART00000060657 (rmi1-001) 52027182-52030831 protein_coding
CIL_00007B_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000165119-ENSG00000178966 CGP 9606 9:83968083-84004074
GeneTranscriptPositionBiotype
ENSG00000165119 (HNRNPK)
heterogeneous nuclear ribonucleoprotein K 		ENST00000351839 (HNRNPK-012) 83968197-83978452 protein_coding
ENST00000360384 (HNRNPK-002) 83968909-83980250 protein_coding
ENST00000376256 (HNRNPK-006) 83973292-83975770 retained_intron
ENST00000376263 (HNRNPK-201) 83968084-83980269 protein_coding
ENST00000376281 (HNRNPK-011) 83968083-83980604 protein_coding
ENST00000457156 (HNRNPK-005) 83970313-83980190 protein_coding
ENST00000472778 (HNRNPK-008) 83972844-83980616 nonsense_mediated_decay
ENST00000481820 (HNRNPK-010) 83969496-83971294 protein_coding
ENST00000483135 (HNRNPK-004) 83976508-83980595 retained_intron
ENST00000492865 (HNRNPK-009) 83969416-83971146 retained_intron
ENST00000493362 (HNRNPK-007) 83969198-83970786 retained_intron
ENSG00000178966 (RMI1)
RecQ mediated genome instability 1 		ENST00000325875 (RMI1-002) 83980798-84004074 protein_coding
ENST00000445877 (RMI1-001) 83980711-84002233 protein_coding
ENST00000615118 (RMI1-201) 83980869-84002762 protein_coding
ENSG00000202523 (Y_RNA)
Y RNA 		ENST00000365653 (Y_RNA.1-581) 83992932-83993033 misc_RNA
CIL_00007B_0003 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000021546-ENSMUSG00000035367 CGP 10090 13:58391142-58411149
GeneTranscriptPositionBiotype
ENSMUSG00000021546 (Hnrnpk)
heterogeneous nuclear ribonucleoprotein K 		ENSMUST00000043269 (Hnrnpk-002) 58391239-58402502 protein_coding
ENSMUST00000116403 (Hnrnpk-001) 58391142-58403343 protein_coding
ENSMUST00000175847 (Hnrnpk-011) 58395165-58402487 protein_coding
ENSMUST00000175939 (Hnrnpk-003) 58398726-58402502 retained_intron
ENSMUST00000176207 (Hnrnpk-008) 58391337-58402649 protein_coding
ENSMUST00000176257 (Hnrnpk-020) 58391960-58394785 retained_intron
ENSMUST00000176269 (Hnrnpk-006) 58395265-58398017 retained_intron
ENSMUST00000176305 (Hnrnpk-014) 58394661-58402103 protein_coding
ENSMUST00000176359 (Hnrnpk-019) 58392122-58393975 retained_intron
ENSMUST00000176558 (Hnrnpk-007) 58397037-58402116 protein_coding
ENSMUST00000176609 (Hnrnpk-015) 58394603-58397065 retained_intron
ENSMUST00000176725 (Hnrnpk-017) 58394690-58396946 retained_intron
ENSMUST00000176797 (Hnrnpk-021) 58392233-58395198 protein_coding
ENSMUST00000176849 (Hnrnpk-012) 58394348-58402142 protein_coding
ENSMUST00000176888 (Hnrnpk-016) 58394540-58395720 retained_intron
ENSMUST00000177019 (Hnrnpk-009) 58391239-58402464 protein_coding
ENSMUST00000177051 (Hnrnpk-018) 58391950-58393868 retained_intron
ENSMUST00000177060 (Hnrnpk-010) 58395195-58402507 protein_coding
ENSMUST00000177117 (Hnrnpk-005) 58395270-58398017 protein_coding
ENSMUST00000177377 (Hnrnpk-013) 58395889-58402110 retained_intron
ENSMUST00000177497 (Hnrnpk-004) 58391239-58398055 protein_coding
ENSMUSG00000065434 (Mir7-1)
microRNA 7-1 		ENSMUST00000083500 (Mir7-1-201) 58392779-58392886 miRNA

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00007B_0001ENSDARG00000018914ENSDART00000097919ENSDART00000131928ENSDART00000132395ENSDART00000135841ENSDART00000137941ENSDART00000140609ENSDART00000143950ENSDART00000147151ENSDART00000147309ENSDARG00000041376ENSDART00000060657CIL_00007B_0002ENSG00000165119ENST00000351839ENST00000360384ENST00000376256ENST00000376263ENST00000376281ENST00000457156ENST00000472778ENST00000481820ENST00000483135ENST00000492865ENST00000493362ENSG00000178966ENST00000325875ENST00000445877ENST00000615118ENSG00000202523ENST00000365653CIL_00007B_0003ENSMUSG00000021546ENSMUST00000043269ENSMUST00000116403ENSMUST00000175847ENSMUST00000175939ENSMUST00000176207ENSMUST00000176257ENSMUST00000176269ENSMUST00000176305ENSMUST00000176359ENSMUST00000176558ENSMUST00000176609ENSMUST00000176725ENSMUST00000176797ENSMUST00000176849ENSMUST00000176888ENSMUST00000177019ENSMUST00000177051ENSMUST00000177060ENSMUST00000177117ENSMUST00000177377ENSMUST00000177497ENSMUSG00000065434ENSMUST00000083500
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00007B_0001ENSDARG00000018914ENSDART00000097919ENSDART00000131928ENSDART00000140609ENSDART00000147309ENSDARG00000041376ENSDART00000060657CIL_00007B_0002ENSG00000165119ENST00000351839ENST00000360384ENST00000376281ENST00000472778ENST00000492865ENSG00000178966ENST00000325875ENST00000445877ENST00000615118ENSG00000202523ENST00000365653CIL_00007B_0003ENSMUSG00000021546ENSMUST00000043269ENSMUST00000116403ENSMUST00000175847ENSMUST00000175939ENSMUST00000176207ENSMUST00000176305ENSMUST00000176797ENSMUST00000176888ENSMUST00000177051ENSMUST00000177497ENSMUSG00000065434ENSMUST00000083500
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000018914 ENSDART00000097919 N/A N/A N/A 14.731±1.48 N/A N/A 14.740±9.64 58.940±5.60 N/A N/A 7.495±0.00 N/A N/A N/A
ENSDART00000131928 N/A N/A N/A N/A N/A N/A 13.380±0.53 N/A 0.891±0.00 N/A 3.699±0.00 N/A N/A N/A
ENSDART00000132395 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDART00000135841 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDART00000137941 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDART00000140609 N/A N/A N/A N/A N/A N/A 7.151±0.00 N/A N/A N/A N/A N/A N/A N/A
ENSDART00000143950 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDART00000147151 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDART00000147309 N/A N/A N/A 21.917±3.94 N/A N/A N/A N/A N/A N/A 2.607±0.00 N/A N/A N/A
ENSDARG00000041376 ENSDART00000060657 N/A N/A N/A 0.866±0.73 N/A N/A 0.333±0.22 2.617±1.89 0.082±0.00 N/A 0.294±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000165119 ENST00000351839 N/A N/A N/A 22.981±0.00 N/A N/A N/A N/A N/A N/A N/A 22.321±5.85 N/A 18.617±0.00
ENST00000360384 86.840±0.00 87.110±0.00 18.265±0.00 50.729±14.41 57.707±9.84 67.384±31.26 33.389±12.49 63.463±20.48 50.227±10.08 71.897±32.02 39.732±21.46 99.671±68.07 142.201±35.38 108.480±10.07
ENST00000376256 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000376263 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000376281 30.610±0.00 59.665±0.00 13.987±0.00 30.713±9.78 26.894±1.70 29.325±11.76 21.359±9.36 32.735±13.94 25.446±4.28 40.753±15.83 12.805±5.68 43.520±15.32 64.759±7.18 45.059±16.48
ENST00000457156 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000472778 N/A N/A N/A 31.224±0.00 N/A 38.996±0.00 N/A 39.870±0.00 N/A 42.765±0.00 15.151±0.00 N/A N/A N/A
ENST00000481820 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000483135 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000492865 N/A N/A 109.924±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000493362 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000178966 ENST00000325875 0.188±0.00 N/A N/A 0.058±0.00 1.030±0.00 N/A N/A 0.417±0.35 N/A 0.982±0.00 N/A 1.756±1.56 0.873±0.70 2.630±0.12
ENST00000445877 N/A N/A 1.807±0.00 0.622±0.00 0.753±0.00 1.394±0.00 N/A 0.910±0.00 1.034±0.00 0.762±0.00 0.407±0.00 2.422±0.00 N/A 2.198±0.00
ENST00000615118 N/A N/A 0.374±0.00 0.167±0.00 0.690±0.00 1.767±0.00 0.119±0.07 N/A N/A 0.816±0.00 0.447±0.00 1.220±0.85 N/A N/A
ENSG00000202523 ENST00000365653 N/A N/A N/A N/A N/A N/A N/A 0.157±0.00 N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000021546 ENSMUST00000043269 52.711±23.61 18.940±2.88 159.362±12.40 114.149±67.74 31.330±10.27 28.825±8.45 22.872±2.90 39.146±11.48 75.394±60.27 55.850±13.90 29.818±3.87 57.465±52.37 102.414±71.07 36.552±11.21
ENSMUST00000116403 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 10.231±1.23 N/A N/A N/A
ENSMUST00000175847 N/A N/A N/A 115.099±0.00 N/A N/A N/A N/A N/A N/A N/A 122.963±0.00 195.620±74.22 67.701±0.00
ENSMUST00000175939 N/A 191.668±36.00 N/A N/A 128.868±5.27 124.337±23.40 55.700±9.22 110.943±16.38 75.766±5.97 171.473±9.97 N/A 185.197±25.60 N/A N/A
ENSMUST00000176207 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 22.157±0.56
ENSMUST00000176257 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000176269 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000176305 N/A N/A N/A 92.368±0.00 39.336±0.00 N/A N/A N/A N/A N/A N/A 114.768±0.00 175.938±67.74 52.345±0.00
ENSMUST00000176359 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000176558 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000176609 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000176725 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000176797 81.958±35.79 104.038±5.99 N/A N/A 65.233±29.14 87.021±4.19 29.641±3.37 59.639±6.42 71.612±7.01 89.035±14.94 N/A 118.960±15.32 309.790±0.00 58.202±9.27
ENSMUST00000176849 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000176888 N/A N/A N/A N/A 55.379±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000177019 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000177051 N/A N/A N/A 70.161±0.00 N/A N/A N/A N/A N/A N/A N/A 100.838±0.00 145.272±59.31 22.899±0.00
ENSMUST00000177060 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000177117 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000177377 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000177497 N/A N/A N/A N/A 16.874±0.91 14.749±3.07 N/A N/A N/A 17.988±0.00 N/A 25.383±0.00 31.623±11.00 8.526±0.00
ENSMUSG00000065434 ENSMUST00000083500 N/A N/A 507.152±0.00 N/A 1957.235±127.16 N/A 1536.790±0.00 N/A 51.297±26.45 1091.540±0.00 11.677±2.13 1181.099±1916.41 28.403±0.00 N/A

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