C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: ABO blood group (transferase A, alpha 1-3-N-acetylgalactosaminyltransferase, transferase B, alpha 1-3-galactosyltransferase)
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000015787 Abo 10090 - 2:26842503-26864979 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000102900 Abo-001 26842503-26864979 protein_coding
  ENSMUST00000114045 Abo-002 26842503-26856798 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBrainColonLungOvaryPlacentaTestisENSMUST00000102900ENSMUST00000114045
Transcript ID Bladder Brain Colon Lung Ovary Placenta Testis
ENSMUST00000102900 0.009±0.00 0.016±0.00 3.150±1.23 0.420±0.28 0.113±0.04 0.163±0.17 0.972±0.13
ENSMUST00000114045 N/A N/A N/A N/A N/A 0.028±0.00 0.470±0.40

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006IU CIL_0006IU_0002 CGP 2:26667674-26864979
CIL_0006IX CIL_0006IX_0002 CGP 2:26842503-26902879

Gene Ontology
GO IDEvidence TypeGO Description
GO:0004380 IDA glycoprotein-fucosylgalactoside alpha-N-acetylgalactosaminyltransferase activity
GO:0004381 IDA fucosylgalactoside 3-alpha-galactosyltransferase activity
GO:0005576 IEA extracellular region
GO:0005794 IEA Golgi apparatus
GO:0005975 IEA carbohydrate metabolic process
GO:0006486 IEA protein glycosylation
GO:0016020 IEA membrane
GO:0016021 IEA integral component of membrane
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000005257 protein_coding Danio_rerio
ENSDARG00000011283 protein_coding Danio_rerio
ENSDARG00000019207 abo ABO blood group (transferase A, alpha 1-3-N-acetylgalactosaminyltransferase; transferase B, alpha 1-3-galactosyltransferase) protein_coding Danio_rerio
ENSDARG00000025275 gbgt1l1 globoside alpha-1,3-N-acetylgalactosaminyltransferase 1, like 1 protein_coding Danio_rerio
ENSDARG00000035555 gbgt1l3 globoside alpha-1,3-N-acetylgalactosaminyltransferase 1, like 3 protein_coding Danio_rerio
ENSDARG00000068503 gbgt1l4 globoside alpha-1,3-N-acetylgalactosaminyltransferase 1, like 4 protein_coding Danio_rerio
ENSDARG00000091936 protein_coding Danio_rerio
ENSDARG00000091944 protein_coding Danio_rerio
ENSDARG00000091969 protein_coding Danio_rerio
ENSDARG00000092718 gbgt1l2 globoside alpha-1,3-N-acetylgalactosaminyltransferase 1, like 2 protein_coding Danio_rerio
ENSG00000175164 ABO ABO blood group (transferase A, alpha 1-3-N-acetylgalactosaminyltransferase; transferase B, alpha 1-3-galactosyltransferase) protein_coding Homo_sapiens

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